Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00037 ATGGCGGCGGCTGCTGCTTCTTCTTCGTCTAATTCTTCCTGGACTTACCATGTGTACTTGAGTTTCAACGGCGAAGACACTCGTCGCGGTTTTACTTCTCATCTTTATAACGCTCTGAAGCAGAAAGGAATCCATGCTTTCATGGACGATACAGATATTGAAAAGGGAGATGATATCTCTGGTGAATCATTTTTGCGGGCAATTGAAGCATCACAAATTGTGTTAGTAATTTTCTCTCCTGCGTATGCTTCTTCCCAAGATTGTCTGGATGAGCTGGTGAAGATAATGGAGTGTCAAAGAAGGCTACCTCAGTTAGTTATCCCCATATTCTATTACGTAGATTGGTCCGAAGTTCGTCGTCAACGAGGCAGATATGGTGAAGCAATCGAGCAACACGAAAAAAGATTGGGAAGCGAGAGTGATGGGGTGATGCGGTGGAGGGAGGCACTCACCGCAGCTTCCGGCATTACCGGCTTTAGTTCTTCAGCATATCGGTCTGAAAGTGAGCTGGTTGAGAGAATTGTTGAGAGTGTTTTAAGAATGTTAGACATTGAAGAATTGTTTGTCGGTGAACATCCAGTGAGAATAGAGTCACAAGTTAATGAACTAAAAGTTGATGAATGGTTCAATTACGATGTGTTCTTGAATTTTAGAGGCGAAGACACTCGTCGCGGTTTCACTTCTTACCTTTATAACACTCTAAGACAGTCAGGAATCCACGCTTTCATGGACGATTCAGGGCTCGAAAGGGGAGAAGAGCTCTCTAGCTCATTAGTGCAAGCAATTGAAAGATCACAAATTGCTTTGGTAATTTTTTCTCCAGACTATGCTTCTTCCCGGTGGTGTCTGGATGAACTGGTGAAGATAATGGAGTGTAAAAAAGGTCTGGCTCAGGTGGTTATCCCTATCTTCTATGAAGTAGATCCGTCTGATGTTCGTCATCAACGAGACAGATATGGTAAAGCAATTGAACAACACGAAGAAAGATTGGGAAGCAAGGGTGATGGGGTGATGCGGTGGAGGGAGGCACTCACGGCAGCTGCCAACATTTCCGGCTTTAGTTCTTCAGCATATCGATATGGTAAAGCAATTGAACAACACGAAGAAAGATTGGGAAGCGAGGGTGATGGGGTGATGCGGTGGAGGGAGGCACTCACGGCAGCTGCCAACATTTCCGGCTTTAGTTCTTCAGCATATCGGTCGGATAGTGAGATGATTCAGGCTATTGTTGAGAATGTTTCAAAAAGAGTAGACACTGGACAATTGGTTGTCGCTGAGCATCCGGTGGGAATAGAGTCACGAGTTCATGAATTGACAATTGAATGGTCACAAAAGAGATCCGAAAAACATCTTATCGTAGGCCTCTGGGGGATGGGAGGTGTGGGCAAAACAACTATTGCCAGAGCCATTTACAATACAATTGGCCGTAAGTTTAGAGCAAGAAGTTTTCTTGAAAATATAAGAGAAAAATCAGAACATACTAATGGCCAAATTAATTTGCAAAAGCAACTCATTTATGATATCATTAAAAATGAAGTTTTCAACATACCTGACATTAATAGAGGGAAAAAAATAATTCAAAAAAGATTTCCCAAAATAAAAGCATTTGTTGTATTGGATGATGTGGATAGTGTGGATCAACTAAAAGCATCATGTGGGAGTCTTGAATGGTTTTGTCCTGGGAGTGTGATATTCATAACAACTAGAGATCTCCGTTTACTTGATGCCATAAATGCTGACCATAAGTATCCAATGAGAGAAATGAATGGAATGGAGCCTCTGATGCTTTTCAGTTGGCACGCTTTTAAGCAAGCAAATCCTTCTGAAAGCTTCGTGGAATTATCTAAAGAGGTAGTTGATTATTGTGATGGACTTCCACTGGCTCTTGAAATCCTTGGTTCTTGTCTACGTGGAAGAACAATTGAACAATGGAATAATGCATTGTCCAAACTACATAGCATTCCTCATAAAGATTTACAAAAAAAGTTAAAAATAAGCTATGATGGATTGGATGATGACACACAGAGGGATATTTTTCTTGACATATGTTGCTTCTTTATCAAAAAGGACAGGAACTATGTTACACAGATTTTAGATGATTGTAAGCTTCATGCAAAAGATGGACTACAAATCCTCATAGAGCGAAGCCTTGTAAAAGTTGGGAGGAATAATAAGCTTGAAATGCATGATTTATTGCAAGAGATGGGGAAAGAAATTGTCCGTGAAAGCTCACCTAGAGATCCTAAGAAACGTAGTAGATTGTGGTTTGATGAAGATGGAACCGAAGTTATTCAGGGTATATCTCTAAAGGCATCAGAAACCAGGAGAGAGCATCTCATTGATTCTGAGGCATTTAAGAAGATGACAGAACTTAGATTGCTCCAACTAGATTATGTAAATCTTAAAGGAGATTACAACCATCTTTCCAAAAAGCTCAGATATAGCAACCTCAAAGTAGTTTGGATAAAGCCCCAGAAGTTGTCAATGTTGAAGACACTCCATCTCAGTCATTCTCCTTACTTGACACAAACTCCTGATTTTTCATACCTACCAAACCTTGAAAGGCTTGTGATGAAAGATTGTCGGAGCTTGATTTTAATTCACAAGAGCATTGGAGATCTTAAAAATCTTCTTCATGTGAATCTAAAAGATTGTAAGAGCCTCAAAGATCTTCCTAGAAGCATCTACAAGTTGAAATCTGTAAAAACTCTCATTCTTTCTGGCTGTTTTTTGATTGACCATCTAGAAGAAGATATTGAGCAGATGGAGTCCTTGACAACTCTTATGGCAGATAACACTGGCATAATAAAAGTACCCTTTTCATTAGCAAGATTGGAAGGGCTTAAGCATGGATATGTTTCTTTCCCTGGCCATGAAGGAAGAGCACAAGATATATTTCCTTCTCTCATATGGTCTTGGATGTCACCTGACAATATTCCCCACTCCCGTATTGAAGAATTTGTGCAAAGCATATCATCTATAGATATCTCAGTTAGACAGGATAGTGGCTTTTGTGGCCTATCTCCATTTCTGGGCGATCTTGTGAAGCTCCGAGGTATGTGGGAGCAATGTCGATCAAGGTTTCGATTTAATGAAAGAATGGCAAGACTTTTGGATGCCTTGTATGAGACAAATTTTGTAGGATTTGAATCAACTCGAGATATACCCCAGATCTCACATATGGAAGCTTCTCCGTCATGTGAGGTCCATGACCAAGTTCACATTGCAAGGCCAGCAGATTCCTTGAAATCTCTTTTAATTCAACTTGGAGTGTTAGACAAAGCAAACGTGTTGAAAGAGGAAATTTCTCAGGGATGGAAGTATGGTGGGTGGGATGATTCTCAACTGCCTGGTGACCAGTATCCCGACTGGTTCATCTTCAAGGGTGAAGGACGGTCGGTAATTTTGAAGGTGCCTCAAGTCATAGGTTGCCGCTTGAAAGCAATACTTCTCAATGTTGTGTATTGTTCTTGCATGGATAACACAATGCCTCAACTTCTCATGAGTGTTCTGATCATCAATCACACGAAGGCTACTGTTAATCAGCTCAAGGGAGACTCGGCAACTTTCCATGAAGATGGAGAATGGCACAGTATCATTTCAAGTTTTCAACCTGGTGATTGGGTTGAGCTTGTTTTAAGTATTGGGCCTCAATTTCCTGTGAAGATGATTGCAGCATACCTGATTTATGATGGTTCTAAGCCTCGCAGAGTCAATTTCGAGAAACGTGTTTTGAACAACGCTTATCATCTTCAAAACAGGTTTTCCAGAAAAGCACAGTAG 3783 0.4073 MAAAAASSSSNSSWTYHVYLSFNGEDTRRGFTSHLYNALKQKGIHAFMDDTDIEKGDDISGESFLRAIEASQIVLVIFSPAYASSQDCLDELVKIMECQRRLPQLVIPIFYYVDWSEVRRQRGRYGEAIEQHEKRLGSESDGVMRWREALTAASGITGFSSSAYRSESELVERIVESVLRMLDIEELFVGEHPVRIESQVNELKVDEWFNYDVFLNFRGEDTRRGFTSYLYNTLRQSGIHAFMDDSGLERGEELSSSLVQAIERSQIALVIFSPDYASSRWCLDELVKIMECKKGLAQVVIPIFYEVDPSDVRHQRDRYGKAIEQHEERLGSKGDGVMRWREALTAAANISGFSSSAYRYGKAIEQHEERLGSEGDGVMRWREALTAAANISGFSSSAYRSDSEMIQAIVENVSKRVDTGQLVVAEHPVGIESRVHELTIEWSQKRSEKHLIVGLWGMGGVGKTTIARAIYNTIGRKFRARSFLENIREKSEHTNGQINLQKQLIYDIIKNEVFNIPDINRGKKIIQKRFPKIKAFVVLDDVDSVDQLKASCGSLEWFCPGSVIFITTRDLRLLDAINADHKYPMREMNGMEPLMLFSWHAFKQANPSESFVELSKEVVDYCDGLPLALEILGSCLRGRTIEQWNNALSKLHSIPHKDLQKKLKISYDGLDDDTQRDIFLDICCFFIKKDRNYVTQILDDCKLHAKDGLQILIERSLVKVGRNNKLEMHDLLQEMGKEIVRESSPRDPKKRSRLWFDEDGTEVIQGISLKASETRREHLIDSEAFKKMTELRLLQLDYVNLKGDYNHLSKKLRYSNLKVVWIKPQKLSMLKTLHLSHSPYLTQTPDFSYLPNLERLVMKDCRSLILIHKSIGDLKNLLHVNLKDCKSLKDLPRSIYKLKSVKTLILSGCFLIDHLEEDIEQMESLTTLMADNTGIIKVPFSLARLEGLKHGYVSFPGHEGRAQDIFPSLIWSWMSPDNIPHSRIEEFVQSISSIDISVRQDSGFCGLSPFLGDLVKLRGMWEQCRSRFRFNERMARLLDALYETNFVGFESTRDIPQISHMEASPSCEVHDQVHIARPADSLKSLLIQLGVLDKANVLKEEISQGWKYGGWDDSQLPGDQYPDWFIFKGEGRSVILKVPQVIGCRLKAILLNVVYCSCMDNTMPQLLMSVLIINHTKATVNQLKGDSATFHEDGEWHSIISSFQPGDWVELVLSIGPQFPVKMIAAYLIYDGSKPRRVNFEKRVLNNAYHLQNRFSRKAQ 1260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00037 1260 Gene3D - 9 190 IPR035897 -
Pral4792g00037 1260 Gene3D - 209 358 IPR035897 -
Pral4792g00037 1260 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral4792g00037 1260 Gene3D - 415 583 IPR027417 -
Pral4792g00037 1260 Gene3D - 359 414 IPR035897 -
Pral4792g00037 1260 SMART till_3 15 156 IPR000157 GO:0007165
Pral4792g00037 1260 SMART till_3 210 350 IPR000157 GO:0007165
Pral4792g00037 1260 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 159 IPR035897 -
Pral4792g00037 1260 Gene3D Ribonuclease Inhibitor 764 1044 IPR032675 -
Pral4792g00037 1260 Pfam NB-ARC domain 438 668 IPR002182 GO:0043531
Pral4792g00037 1260 Gene3D - 588 671 IPR042197 -
Pral4792g00037 1260 FunFam Disease resistance protein (TIR-NBS-LRR class) 207 360 - -
Pral4792g00037 1260 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 415 682 IPR027417 -
Pral4792g00037 1260 Pfam TIR domain 210 346 IPR000157 GO:0007165
Pral4792g00037 1260 Pfam TIR domain 16 180 IPR000157 GO:0007165
Pral4792g00037 1260 SUPERFAMILY L domain-like 780 1019 - -
Pral4792g00037 1260 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 211 1024 IPR044974 GO:0006952
Pral4792g00037 1260 SUPERFAMILY "Winged helix" DNA-binding domain 659 764 IPR036390 -
Pral4792g00037 1260 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral4792g00037 1260 PRINTS Disease resistance protein signature 529 543 - -
Pral4792g00037 1260 PRINTS Disease resistance protein signature 622 636 - -
Pral4792g00037 1260 PRINTS Disease resistance protein signature 452 467 - -
Pral4792g00037 1260 PRINTS Disease resistance protein signature 825 841 - -
Pral4792g00037 1260 SUPERFAMILY Toll/Interleukin receptor TIR domain 209 353 IPR035897 -
Pral4792g00037 1260 ProSiteProfiles TIR domain profile. 209 417 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00037 Pral-Chr4792 281175 290373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00037 810 948 WRKY Transcription Factor Family AT4G12020 35.172 6.24e-09 58.9