Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00035 ATGGCTTCTTCTTCTTCTTCCGGTTCTCCCTGGACTTACGATGTGTTCTTGAGTTTCAGAGGCGAAGACACCCGTTACGGTTTCACTTCTCATCTTACTGAGGCTCTGAGACACTCAGGAATCCATTCTTTCATGGATGATTCAGGGATTGAGAGGGGAGAGAGGATCTCTGGCTCGATATTGCAAGCAATTGAAAGATCAGGAATTGCGTTACCAATTTTCACTCCGGCTTATGCTTCTTCCCATTATTGCCTGGATGAACTGGTGAAAATGATGGAGTGTCAAAGAACTCAAGCTCAAGTGGTCATGCCAATATTCCATGACGTGGAGCCGTCAGATGTTCGTAATCAGAGAGGCAGATACGGCGAAGCAATGGAACGACACGAGCAAAGGTTGGGAAGGGGCAGTGATCGGGTGATGCAGTGGAGGCAGGCACTTACCCAAGCTGCCAACATTTCCGGCTTTATTTCCTCGCCAAATCGGAATCAACTTGGTCTGATTGAGGATATTGTTGGGGCTGTTTCAGAAAAATTAGACTCTGGACAATTGTTTATTGCTGACCATCCAGTGGGAGTGGAGTCACGAGTTCATGAACTGACAATGGAATGGTTAAAAGAGAGATCACCAAAACCTCTTACCATAGGTCTCTTTGGGATGGGAGGCGTTGGCAAAACCACTATTGCCAAAGCCATTTACAATAAAATTAGTCGTCAGTTTGGTGCAAGAAGTTTCCTTGCAAATATAAGAGAGAATTCAAAGCATGCTAGTGACCTAGTTAATTTGCAAAAGCAACTCATTTGTGATATCACCAAAACACAAGTTTTCAAGATACCTAATATTGATAGAGGGAAAAAAATAATCCAGGAAAGATTTCCCAACATAAAAGCATTTCTTGTGTTGGATGATGTGGATCGCATCAATCAACTAAAAGGATTGTGTGGGAGTCACAAATGGTTTTGTCCAGGGAGTGTAATAATCATAACAACTAGAGATCTGCGCTTGCTTCATTTTATTAAAGCTGGCTATAAGTATAGAGTGAGAGAAATGAATAAAATTGAGTCTCTTGAGCTTTTAAGTTGGCATGCTTTTGACCAAGCAACTCCATTAAAAGATTTGATTGAACTTTCCAAGGAAGTAGTTGATTATTGTGGGGGACTTCCACTTGCTCTTGAAATCCTTGGTTGTTGTTTGCGTGACAGAACAATTCAAGAGTGGAAGGCTGTATTGTCCAAACTACGAAGAATTCCTAACCAAGATATACATGCAAAGTTAAAAATAAGTTATGATGGATTGAACGATTATATGGAGAAGGATATTTTCCTCGATATATGTTGCTTCTTTGTCAATAAGAATAGGAACTATGTTACAAAGATATTAGATGGCTGCGGACTTCATGCAAAATATGGACTACAAATCCTCATAGAGCGAAGCCTCATAAAAGTTGGTAGGAATAAAAAGCTTGAAATGCATGATTTATTACAAGAAATGGGAAAAGAAATCATCCGTGGAAGCCCACCCAATGACCCTGAGAAACGCAGTAGATTATGGTTTCATGAAGATGTACTTGATGTCTTAGCAGCACATACGGGAACTGAAGCTATTGAGGGTATATCTCTAAAGGTTCAAGGAAGTCATAGAGAGTGTCTCATTGATTCTGTGGCATTTAAGGAGATGAAGAAACTTAGATTGCTCCAACTAGATGATGTCAATCTTAAAGGAGATTATAAGCATCTTTCCAAAAAGCTAAGGTGGCTCTGTTGGCACAGATTTCCATTGAAATACATTCCAAGCAACTTTTGCCAAAAAGAATTAGTTGCTATTGACCTCAAATATAGCAGCCTCAGTAGTTTGGAAAGAGCCCCAGTTGCTGGAGATGCTGAAGACACTCAATCTTAG 1896 0.4035 MASSSSSGSPWTYDVFLSFRGEDTRYGFTSHLTEALRHSGIHSFMDDSGIERGERISGSILQAIERSGIALPIFTPAYASSHYCLDELVKMMECQRTQAQVVMPIFHDVEPSDVRNQRGRYGEAMERHEQRLGRGSDRVMQWRQALTQAANISGFISSPNRNQLGLIEDIVGAVSEKLDSGQLFIADHPVGVESRVHELTMEWLKERSPKPLTIGLFGMGGVGKTTIAKAIYNKISRQFGARSFLANIRENSKHASDLVNLQKQLICDITKTQVFKIPNIDRGKKIIQERFPNIKAFLVLDDVDRINQLKGLCGSHKWFCPGSVIIITTRDLRLLHFIKAGYKYRVREMNKIESLELLSWHAFDQATPLKDLIELSKEVVDYCGGLPLALEILGCCLRDRTIQEWKAVLSKLRRIPNQDIHAKLKISYDGLNDYMEKDIFLDICCFFVNKNRNYVTKILDGCGLHAKYGLQILIERSLIKVGRNKKLEMHDLLQEMGKEIIRGSPPNDPEKRSRLWFHEDVLDVLAAHTGTEAIEGISLKVQGSHRECLIDSVAFKEMKKLRLLQLDDVNLKGDYKHLSKKLRWLCWHRFPLKYIPSNFCQKELVAIDLKYSSLSSLERAPVAGDAEDTQS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00035 631 Gene3D - 179 343 IPR027417 -
Pral4792g00035 631 SUPERFAMILY "Winged helix" DNA-binding domain 419 525 IPR036390 -
Pral4792g00035 631 Pfam TIR domain 13 179 IPR000157 GO:0007165
Pral4792g00035 631 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 155 IPR035897 -
Pral4792g00035 631 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 617 IPR044974 GO:0006952
Pral4792g00035 631 ProSiteProfiles TIR domain profile. 11 178 IPR000157 GO:0007165
Pral4792g00035 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 443 IPR027417 -
Pral4792g00035 631 SMART AAA_5 210 353 IPR003593 GO:0016887
Pral4792g00035 631 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 180 - -
Pral4792g00035 631 Gene3D - 10 178 IPR035897 -
Pral4792g00035 631 PRINTS Disease resistance protein signature 213 228 - -
Pral4792g00035 631 PRINTS Disease resistance protein signature 556 572 - -
Pral4792g00035 631 PRINTS Disease resistance protein signature 290 304 - -
Pral4792g00035 631 PRINTS Disease resistance protein signature 383 397 - -
Pral4792g00035 631 Gene3D - 348 432 IPR042197 -
Pral4792g00035 631 Pfam NB-ARC domain 197 430 IPR002182 GO:0043531
Pral4792g00035 631 SMART till_3 12 152 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00035 Pral-Chr4792 270010 275050 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00035 190 617 WRKY Transcription Factor Family AT5G45050 31.360 2.75e-56 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00035 - - pcin:129287706 777.319