Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00020 ATGGCTACGAGAAACAATGTGGTCTGCTTCTTCTACATGGTCTTGCTTAGCATTTTCTTGAGTTCTCTGCCAACCCAATCAGCTCCTGAAGCTGCTCTCGTGACAGAGCTTCCTGGATTCAGTGGCACTATACCTTCAAAGCATTATGCTGGCTATGTGACTGTGGATGAAAGTCAAGGGAGGAACCTGTATTACTACTTTGTTGAATCAGAAAGAAATCCATCTGAGGATCCAGTGGTTTTATGGCTCAACGGTGGACCCGGGTGCTCTAGCTTTGATGGGTTTGTGTATGAGCATGGTCCTTTCAATTTTGAAAAGGCCAAAACCAAGGGATCCTTGCCTACATTGCACCTAAATCCTTACAGCTGGTCAAAGGTCTCCAACATTATATATTTGGATTCTCCAGCTGGTGTGGGGTTTTCTTTCTCAAAGAATAAATCCGATTACATAACTGGAGACATAAAGACTGCTTCAGATACACACACCTTTCTCCTTAAGTGGTTTGAACTCTATCCTGAGTTCCTTTCTAATCCATTCTTCATTGCTGGAGAGTCATATGCCGGAATTTATGTACCTACACTAGCTTATGAAGTAATGAAAGGAATTGAAGCTGGTGCAAGGCCCAACCTTAATTTCAAGGGATATTTGGTTGGAAACGGCTGTACAGATGATGAGTTTGATGGCAATGCTCTTGTTCCATTTGCACATGGGATGGGTCTCATCTCAGATGAATTGTATGAGGAGGTTAGAGTTGAGTGCAATGGGAATTTCTATAATCCATTGAATGAAAATTGTGCAAGCAAGCTAGCAAAAGTTGATCAGGAGATTGATGGGCTAAACATATATGACATTCTAGAACCATGCTATCATTGGCCGGAGACAATAGAGACCACACCATCCTATATCAGGTTGCCATCCAGTTTCCGGCAGTTGGGTGAGACCAAGAGACCTCTACCTGTGAGAAAAAGGATGTTTGGTCGTGCTTGGCCCCTTAGAGCTCCCGTGAGAGATGGAATTGTGCCAACTTGGCCGCAACTCAGCAATAGCCACAACGTTCCATGCACTGATGACGAGGTCGCAAACTCATGGTTGAACAATGACATAGTCAGGAAAGCAATTCACACTGCAGAGAAAGCTGATGTCAGTATTTGGGATTTATGCACGGACAATATTTTCTACGATCATGATGCTGGGAGCATGATCAAATTCCACAAGAACCTGACATCCAGAGGATATCGAGCACTTATATACAGCGGGGATCATGATATGTGTATTCCATTCACTGGGAGTCAAGCATGGACTAGATCAATGGGATACAAAGTTGTGGATGAATGGAGGCCATGGATGGTCAATAATCAAGTTGCTGGTTATATACAAGGATATGATAAAAATCTCACCTTTATGACCATAAAGGGAGCTGGGCACACTGTTCCAGAATATAAGCCACAAGAGTCATTGTATTTCTACAAGCGCTTTCTGGATGGATTGCTGATATAG 1497 0.4309 MATRNNVVCFFYMVLLSIFLSSLPTQSAPEAALVTELPGFSGTIPSKHYAGYVTVDESQGRNLYYYFVESERNPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEKAKTKGSLPTLHLNPYSWSKVSNIIYLDSPAGVGFSFSKNKSDYITGDIKTASDTHTFLLKWFELYPEFLSNPFFIAGESYAGIYVPTLAYEVMKGIEAGARPNLNFKGYLVGNGCTDDEFDGNALVPFAHGMGLISDELYEEVRVECNGNFYNPLNENCASKLAKVDQEIDGLNIYDILEPCYHWPETIETTPSYIRLPSSFRQLGETKRPLPVRKRMFGRAWPLRAPVRDGIVPTWPQLSNSHNVPCTDDEVANSWLNNDIVRKAIHTAEKADVSIWDLCTDNIFYDHDAGSMIKFHKNLTSRGYRALIYSGDHDMCIPFTGSQAWTRSMGYKVVDEWRPWMVNNQVAGYIQGYDKNLTFMTIKGAGHTVPEYKPQESLYFYKRFLDGLLI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00020 498 Pfam Serine carboxypeptidase 38 495 IPR001563 GO:0004185|GO:0006508
Pral4792g00020 498 FunFam Carboxypeptidase 400 495 - -
Pral4792g00020 498 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Pral4792g00020 498 FunFam Carboxypeptidase 353 496 - -
Pral4792g00020 498 FunFam Carboxypeptidase 27 311 - -
Pral4792g00020 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 482 IPR001563 GO:0004185|GO:0006508
Pral4792g00020 498 SUPERFAMILY alpha/beta-Hydrolases 34 496 IPR029058 -
Pral4792g00020 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Pral4792g00020 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Pral4792g00020 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Pral4792g00020 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 465 478 IPR001563 GO:0004185|GO:0006508
Pral4792g00020 498 Gene3D alpha/beta hydrolase 26 323 IPR029058 -
Pral4792g00020 498 Gene3D - 350 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00020 Pral-Chr4792 171630 184381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00020 359 495 Calmodulin-binding Proteins AT2G22960 47.445 1.36e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00020 K16296 - gmx:100792057 838.95