Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00018 ATGGCCGAGCAAGTCCCATATGGCGTGGCTACAAGTCTCATCAACACTTTGGCTTCAGCAGCCTTCAGGGAGGTTGCTTCCATTTATGGGGTTGAGACTGAGATTGAATGGCTGAAGGAAACTGTTAAAGACATCAAAGCCGTGCTTGCTGATGCTGACAAAAAGCAGCACACTGCGGAACTCATCCAGCGCTGGATAACGAAGCTAAGACAAGTTCTTTACGAAGCAGATGACTTGCTTGATGAGATCCACACTCAACATTTGCTGCGCGAGAGGGATGGAAAGGGAAAGGTACGTGAGTTCTTTTCGTCCTCCAACCCAATTGCTTTTCGCCGCAAAATTGCAAGCAGGATTAGAAAAATCAGAGGGAAATTTAATGGTGTTGTTGAAACTATGTCTAAGTTGAATTTAGATCGAAGAGATGTTGAAACGAAGCATGAAAAGAAGAACTGGAGGGAAACTAGTTCTTTTGTGCTCCAAGAGGAGATGGTTGGTAGGGAGGGAAACAAGAAGGACATAATTGATTTGTTGTTGAATGATGATAATAGCCATCAAAAGGTTTCCTTGGTTGCTATTGTCGGCATCGGGGGTTTGGGTAAAACTGCTCTTGCTCAATTGGTGTACAATGATACTGACGTGGAACGTTTTTTCGACAAGCGAATGTGGGTGTGTGTTTCTGAAGATTCTAATGTAAATGCACTTGTTAAGCAGATACTCGAATCATTACTTGGCAAAAAACAGGACGATCAATCATTAGAACTACTTCAAAATGAGCTGCAACAAAATTTAGCTGGCCAAAAATTTGTGCTAGTTTTAGATGATATTTGGGATGATTTTCCCGTAAAGTGGGGAGAGTTAAGGAACTTTTTGGCGTGTGGTGCTAAGGGTAGTAAGATTTTGTTGACTACACGCAATCAGGCGGTAGCCAATAAAATGGGTGCAAAAATGCCATATCTTTTGAAAGGACTGAAAAATGACCAATCTTGGACTCTGTTGAAAAGATTGGCATTTGAGGAAGATAAAATAATGACCGAAAATCTGGAGTCTATTGGCCATAAAATTGCAGAAAAATGTAAGGGTGTTCCGCTGGTAATAAGAGTAATGGGGAGTTTGTTGCGATCAAAAGCGCAGGAAAGTGATTGGGAAGCTATTTTGGAAGGTGACTTTTGGAAGTTATGTGAAGACAATAATTCAATTATGCCAATATTGAAGTTAAGTTATGACAGTTTGGCAAGTGAATTAAAACAATGTTTTGCTTATTGTTCTTCATATCCAAAAGATTGGGTATATGAGAAGGATATACTGATTGATTTGTGGATGGCACAAGGCTTCCTTGAAAGTGAAGTTGAGAAGCGATGTCCAGAAGATGTTGGCGAAGACTACGTTCATATTTTGTTGATGAAGTCTTTCTTGCAAGATGTCGTGATGGATGAATTAGGTGAAATCACACAATTTAAAATGCATGATTTGATGCATGACTTGTCCCGATCAATTATTAGCTCTGATCATTGTCTATATGTTGAGGGGAGACAAAATGTTGTGAGGTGTACTATACATGCTTCTCCTAAAGAATATAACTTTGATAGTTCACAAGATTTGCAGGGCTTTGGTAGATCGAGAACCGCTCTCAAAACAAAGAGAGAATATGAAAAGAATCCATCCAATTCTTTTGTGTTCACACGCTTGCGCAGTCTAGATTTGTCACACTATCGCAAGAGTGATTTGCTTGAATCAATAGGTAAAATGAGCCATCTGAGGTATCTTAATCTCTCTGATTGTTCTCAATTGACTTGTTTGCCCGAAAGTATTAGCAACTTGGTCAATTTGCAGACGTTGAGACTGCAAGACTGTGGTAATCTTGAATTTTCTGGGGATATTATCACAAAGTTAATAAACTTGCGTCGACTTGATATAGGATATTGCTGGGCCTTTGAAGATGGGATGCCGATTGGGTTGGGCAGAATGACGACTCTGCAAAATTTGTCACATTTCATAGTGGGTGATGATGATGAGAAGAGAAAGAAGGCCAAATTGAATGACTTAAAAGAACTTAATCTCAGAGGTAGATTAACCATTGAGAAACTTGGTTTAGTGAGGAATGTAGAGGAGGAGTCCAAGGGTGTTAATTTGAGAACAAAGAAAAACCTCATTTCCTTGACCTTGAGGTGGGGACAATATTCAAAGATGAAAGATCGTGATGCCACGCAGTTATTGGAAAATCTTCACCCTCATCGAAATTTGAAGGCATTGACAATAGAAGAGTACCCAGGGATATGCTTTTCCGATTGGCTCTTGTCATGTGCAAATCTTGTTGAATTGAGGTTCAGTGACATCTACAATTGTCAGTATTTGGCAGCGTTGGAAGGGCTTGGTTCTCTCAAGAGTCTTCACATATTTGGGATGGTTAAATTGGAGTGCATATATTATAAAGAATGTTCCTCATCAACTAACTTCTTCCCATCTTTGGAGGAATTAAACATTCAGAGGTGTGGAAGTTTGAGGGGATGGGATGTGCATGGAAGCATTACCAAAGGGATGGATGCAAAATCTCTCCTTTCTTGA 2562 0.3985 MAEQVPYGVATSLINTLASAAFREVASIYGVETEIEWLKETVKDIKAVLADADKKQHTAELIQRWITKLRQVLYEADDLLDEIHTQHLLRERDGKGKVREFFSSSNPIAFRRKIASRIRKIRGKFNGVVETMSKLNLDRRDVETKHEKKNWRETSSFVLQEEMVGREGNKKDIIDLLLNDDNSHQKVSLVAIVGIGGLGKTALAQLVYNDTDVERFFDKRMWVCVSEDSNVNALVKQILESLLGKKQDDQSLELLQNELQQNLAGQKFVLVLDDIWDDFPVKWGELRNFLACGAKGSKILLTTRNQAVANKMGAKMPYLLKGLKNDQSWTLLKRLAFEEDKIMTENLESIGHKIAEKCKGVPLVIRVMGSLLRSKAQESDWEAILEGDFWKLCEDNNSIMPILKLSYDSLASELKQCFAYCSSYPKDWVYEKDILIDLWMAQGFLESEVEKRCPEDVGEDYVHILLMKSFLQDVVMDELGEITQFKMHDLMHDLSRSIISSDHCLYVEGRQNVVRCTIHASPKEYNFDSSQDLQGFGRSRTALKTKREYEKNPSNSFVFTRLRSLDLSHYRKSDLLESIGKMSHLRYLNLSDCSQLTCLPESISNLVNLQTLRLQDCGNLEFSGDIITKLINLRRLDIGYCWAFEDGMPIGLGRMTTLQNLSHFIVGDDDEKRKKAKLNDLKELNLRGRLTIEKLGLVRNVEEESKGVNLRTKKNLISLTLRWGQYSKMKDRDATQLLENLHPHRNLKALTIEEYPGICFSDWLLSCANLVELRFSDIYNCQYLAALEGLGSLKSLHIFGMVKLECIYYKECSSSTNFFPSLEELNIQRCGSLRGWDVHGSITKGMDAKSLLS 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00018 853 Gene3D - 10 119 - -
Pral4792g00018 853 FunFam Probable disease resistance protein At1g63360 407 497 - -
Pral4792g00018 853 CDD RX-CC_like 7 124 IPR038005 -
Pral4792g00018 853 Pfam NB-ARC domain 167 408 IPR002182 GO:0043531
Pral4792g00018 853 FunFam Probable disease resistance protein At1g61300 145 317 - -
Pral4792g00018 853 PRINTS Disease resistance protein signature 358 372 - -
Pral4792g00018 853 PRINTS Disease resistance protein signature 189 204 - -
Pral4792g00018 853 PRINTS Disease resistance protein signature 580 596 - -
Pral4792g00018 853 PRINTS Disease resistance protein signature 262 276 - -
Pral4792g00018 853 Gene3D - 322 406 IPR042197 -
Pral4792g00018 853 Pfam Rx N-terminal domain 11 95 IPR041118 -
Pral4792g00018 853 Gene3D - 407 497 IPR036388 -
Pral4792g00018 853 SUPERFAMILY L domain-like 486 837 - -
Pral4792g00018 853 Gene3D Ribonuclease Inhibitor 522 668 IPR032675 -
Pral4792g00018 853 Gene3D Ribonuclease Inhibitor 669 844 IPR032675 -
Pral4792g00018 853 Gene3D - 144 318 IPR027417 -
Pral4792g00018 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 421 IPR027417 -
Pral4792g00018 853 PANTHER DISEASE RESISTANCE PROTEIN RP 47 827 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00018 Pral-Chr4792 160897 163703 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00018 187 502 WRKY Transcription Factor Family AT5G45050 25.466 1.87e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00018 - - pcin:129288884 971.074