Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4792g00016 ATGGCGGAACAAATCCCATATGGTGTGGCTACAAGTCTCATCAACACGTTGGCTTCAGCAGCCTTCAGAGAGATTGCTTCCATCTATGGGGTGGAGAGAGAGATTGATTGGCTGAAGGAAACTATTGAAGACATTAAAGCTGTGCTCGCTGATGCTGACCAGAAGCAGCACACTGAACAACTCATCCAGCGCTGGATAACCAAACTCAAACAAGTGCTTTATGAAGCAGATGACTTGCTTGATGAGATCCACGATCAACATTTGCTGCGCATGAGGGACGGAAAAGGAAAGGGAAAGGGAAAGGTACGTGACTTCTTCTCATGCTCCAACCCAGTTGCTTTACGCGGCAAAATTGCTCGCAACATTAGAAAGATTAGAGCGCAATTTAACGATGTTGCTGAAACTATGTCAAAGTTGAATTTAGATCGAAGAGTTGTTGAAAAGAAGCGTGAAAAGAGTAACTGGAGGGAAACTAGTTCTTTTGTGCTCCAAGAGGATGTGGTTGGTAGGGAGGGAAACAAGAAGGACATAATTGATTTGTTGTTCAATCCTAATGGCGATCAAAATGTTTCCTTGGTTTCTATTGTCGGCATTGGGGGCTTGGGCAAAACTGCTCTTGCTCAGTTGGTGTTCAATGATGCCGACGTGCAACGTTTTTTCAACAAGCGAATGTGGGTGTGTGTTTCTGAAGACTTTGATGTGAAATTTCTTGTGAGAAAGATAGTAGAATCATTACTTAACAAAAAAGAGGACGATCAACAATTACAGTTACTTCAAAATAAACTTCAAGAGAATTTGAATGGCCAAAGATATTTGTTAGTCCTTGATGACGTGTGGAATGAGGATCCCGAAAAGTGGCTGCATTTGAAAAATTATTTGATGTGTGGTGCCCAAGGTAGTAAGATTTTAGTGACTACACGCAATCAAGGAGTAAGCAATGTAATGGATGTAAAAATGCCATATCTTTTGGAAGGATTAAAAAATGACCAATCTTGGAGTTTGTTGAAAAGATTGGCATTTGACCAAGGTAAAATGATGACCCAAAATCTTGAGTGTATTGGCCAAAAAATTGCGGAAAAATGTGCCGGTGTTCCACTGGGAATAAGAGTTATGGGAAGGTTGTTGCGATCAAAATCTTTGGAAAGTGATTGGGAAGCAATCTTGGAAGGTGACTTTTGGAATACACTTGTAAATGAGAATTCAGTTATGCCAATTTTAAAGTTGAGTTATGACAATTTGGCAATTGAATTAAAACAGTGTTTTGCTTATTGTTCTTTATACCCAAAAGGTAGGAAATATGGAAAGGATGAATTGATTGACTTGTGGATGGCACAAGGCTTCCTTGAAAACAAAGATGAGAACAATCAATGTCTTGAAGACGTTGGTGAAGAGTATGTTCGTATTTTGTCGATGAAATCGTTTTTGCAAGACATTGAGATGGATGAATTAGGTGAAATAAAATATTTTAAAATGCATGATTTGATGCACGACTTGTCCCAATCAGTTGCTACCTCTGATTATTGCCTACATGTTGAGGGGAGAAAAAATCTTGCGAGGTGTCCTATCCATGCTTCTTTTGAGAAAAACAACTCCCTTGATTCATTGAAAATGCTGGATCCAAGTAGATTGAGAACTTTTCTTGAAATAAATAGAAAAGGTGAAAGGAATCCGTCCGATTTTTTTGAGTTCAAACGCTTACGTAGTCTGAATTTATCATTGCATGGTGGGATGAGAGATTTGCCTAAATCAATAGGTAAAATGAGCCATTTGAGGTATCTTAATCTCTCCTTTTGTTCTCAGTTGACTTGCTTGCCCGAAAGTATAAGCAGCCTAGTCCATTTGCAAGCATTGATATTGAATTGGTGTGGCCATCTTAAATTTTCTGGAGATATTATCACAAAGTTGATAAATTTGCGCCAACTTGATATAAAAGGTTGCAAGGCCTTTGAAGCTGGGATGCCCATCGGGTTAGACAGGATGACTACCATGCAAAGGTTGTCACATTTCATAGTCGGTAGTGATGATAAAGTGACAAAGAAGGCCAAATTGAATGAATTAAAAGAACTAAACCTTAGAGGTAAGTTAGTCATTGAGAAACTTGGTTCAGTGATGGATGTGGAGGAAGAGTCTGGGGATGTTAATTTGATAGCAAAGAAAAACCTCATTTCCTTGACCCTAAAATGGGGAGACCATCCAGAGATGAAAAACAATGATGCTACAAGATTATTGAAAAATCTCCGCCCTCATCAAAATTTGAAGGCTTTGATAATAGAAAAGTACCCGGGAGGATGCCTTTCCCGATGGCTTTTGTCGTGTACAAATCTAGTTGAATTGAAGCTCTCCAGTATGAGAACTTGTCAATACTTGCCACCATTGGAAGGACTTGTTTGTCTCAAGACTCTTCACATCAAGTTCATGCATAAATTGGAGTGCATATATTATAAGGGACGTTCCTCTTCAACTTACTTCTTCCCATCTTTGGATGAATTAAAAATTGAGTGCTGTGGAAGTTTGAGGGGGTGGCAAAGGGAGGATAATGTCCGAACTACAAGAGATAATGGGTGGCATCATTCACTACCTCCATTTTCACGTCTTTCATCTTTACAAATTGATGCATGCCCAAACCTAAGTTGCATGCCTACTTTTCCAAATCTCGTGAGCCATCTGGAATTAATTGACTCTAGCACAAAGCCATTGGTAGACACATTAAATATGAGCACAATTGGGCCATCAACATCAGATGATATGACCCCTTCTCTCTCCATGCTTAAGTCTCTTCACATTGAAGGGATAGACATGGAAGCATTACCAGAGGAATGGATGCAAAATCTCTCCTCTCTTAAACATCTTTCGATTGCCGATTTTTCAAGTCTAGAGAAACCATTTCATCATATGCGAAATCTATCTTCTGCACTTGAAGCATTCACTGTTGGCATCCTTGGTTCATGGTATGGTGATGAGGATTATAATTTGAGTCGCTGGTCTCAGATGAATGAAAGGTTCATTGGGCTCAACAAATTATGCAGATTTGTGTGCAGCGAAGCCATTGCAGCAGATATCAAATCTGATAGATCTTTCTCTCAATATACATTCATAGCAGAGAACCAGCAATTTGCCTTCGGAAGATTGAAGCCAAATGACAATAAACTGCGGGTCTCACCCTCTTGA 3168 0.3946 MAEQIPYGVATSLINTLASAAFREIASIYGVEREIDWLKETIEDIKAVLADADQKQHTEQLIQRWITKLKQVLYEADDLLDEIHDQHLLRMRDGKGKGKGKVRDFFSCSNPVALRGKIARNIRKIRAQFNDVAETMSKLNLDRRVVEKKREKSNWRETSSFVLQEDVVGREGNKKDIIDLLFNPNGDQNVSLVSIVGIGGLGKTALAQLVFNDADVQRFFNKRMWVCVSEDFDVKFLVRKIVESLLNKKEDDQQLQLLQNKLQENLNGQRYLLVLDDVWNEDPEKWLHLKNYLMCGAQGSKILVTTRNQGVSNVMDVKMPYLLEGLKNDQSWSLLKRLAFDQGKMMTQNLECIGQKIAEKCAGVPLGIRVMGRLLRSKSLESDWEAILEGDFWNTLVNENSVMPILKLSYDNLAIELKQCFAYCSLYPKGRKYGKDELIDLWMAQGFLENKDENNQCLEDVGEEYVRILSMKSFLQDIEMDELGEIKYFKMHDLMHDLSQSVATSDYCLHVEGRKNLARCPIHASFEKNNSLDSLKMLDPSRLRTFLEINRKGERNPSDFFEFKRLRSLNLSLHGGMRDLPKSIGKMSHLRYLNLSFCSQLTCLPESISSLVHLQALILNWCGHLKFSGDIITKLINLRQLDIKGCKAFEAGMPIGLDRMTTMQRLSHFIVGSDDKVTKKAKLNELKELNLRGKLVIEKLGSVMDVEEESGDVNLIAKKNLISLTLKWGDHPEMKNNDATRLLKNLRPHQNLKALIIEKYPGGCLSRWLLSCTNLVELKLSSMRTCQYLPPLEGLVCLKTLHIKFMHKLECIYYKGRSSSTYFFPSLDELKIECCGSLRGWQREDNVRTTRDNGWHHSLPPFSRLSSLQIDACPNLSCMPTFPNLVSHLELIDSSTKPLVDTLNMSTIGPSTSDDMTPSLSMLKSLHIEGIDMEALPEEWMQNLSSLKHLSIADFSSLEKPFHHMRNLSSALEAFTVGILGSWYGDEDYNLSRWSQMNERFIGLNKLCRFVCSEAIAADIKSDRSFSQYTFIAENQQFAFGRLKPNDNKLRVSPS 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4792g00016 1055 CDD RX-CC_like 7 134 IPR038005 -
Pral4792g00016 1055 Gene3D - 410 502 IPR036388 -
Pral4792g00016 1055 SUPERFAMILY L domain-like 490 959 - -
Pral4792g00016 1055 Pfam Rx N-terminal domain 11 90 IPR041118 -
Pral4792g00016 1055 Gene3D - 325 409 IPR042197 -
Pral4792g00016 1055 Pfam NB-ARC domain 171 412 IPR002182 GO:0043531
Pral4792g00016 1055 Gene3D - 10 144 - -
Pral4792g00016 1055 Gene3D Ribonuclease Inhibitor 528 971 IPR032675 -
Pral4792g00016 1055 PRINTS Disease resistance protein signature 585 601 - -
Pral4792g00016 1055 PRINTS Disease resistance protein signature 265 279 - -
Pral4792g00016 1055 PRINTS Disease resistance protein signature 361 375 - -
Pral4792g00016 1055 PRINTS Disease resistance protein signature 192 207 - -
Pral4792g00016 1055 FunFam Probable disease resistance protein At1g61300 149 320 - -
Pral4792g00016 1055 Coils Coil 35 55 - -
Pral4792g00016 1055 FunFam Probable disease resistance protein At1g63360 410 501 - -
Pral4792g00016 1055 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 424 IPR027417 -
Pral4792g00016 1055 Gene3D - 148 320 IPR027417 -
Pral4792g00016 1055 PANTHER DISEASE RESISTANCE PROTEIN RP 49 873 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4792g00016 Pral-Chr4792 134954 139825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4792g00016 189 655 WRKY Transcription Factor Family AT5G45050 23.941 1.10e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4792g00016 - - pcin:129288884 1137.48