Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4789g00049 ATGTCGAAATTGAATTTAGATGGAAGAGTTGTTGAAATGAAGCATGAGAAGAGTAACTGGAGGGAAACTAGTTCTTCTGTGCTCCAAGAGGAGATGGTTGGCAGGGAGGGAAACAAGAAGGACATAATTGATTTGTTGTTGAATGATGATAATAGCCATCAAAATGTTTCCTTGGTTGCTATTGTCGGCATTGGGGGTTTGGGTAAAACTGCTCTTGCCCAGTTGGTGTACAACGATGCTGACGTGGAGCGTTCTTTCCACAAGCGAATTTGGGTGTGTGTTTCTCAAGGCTCTGATGTAAATGTGCTTGTTAAACTGATGCTAGAATCATTACTTAAAAAGGAAGAAAAAGATAATCAAGGACGAGAGTTGCTTGAAAATAAGCTTAAACTACATTTAGATGGCCAAAAATTTTTGCTAGTTTTAGATGATATTTGGGATGATTTTCCCAGAAAGTGGGAAGAGTTGAAGAAGGTTTTGATGTGTGGTGCTGAGGGTAGCCAGATTTTGTTGACTACACGTGATCAAGCGATAGTCAAGAGAATGGGTATAAAAACGCCATATCTTTTGGAAGGATTGAACAATGACCAATCTTGGACTTTGTTGAAAAGATTGGCATTTGACGATGATAAAATAATGACCCCAAATCTGGAGTCTGTTGGCCAAAAAATTGCAGAAAAATGTAAGGGTGTTCCGCTGGCAGTAAGAGTTATGGGAGGTTTGTTGCGATCAAAATTGCGGGAAACTGACTGGGAAGATCTCTTGAAACGTGACTTTTGGAAGCCACATGACAATAATGATTTAATTATGCCAATTTTAAAGTTGAGTTATGACAGTCTAGCAACTGAATTAAAACAGTGTTTTGCTTATTGTTCTTTATATCCAAAAGATTGGGAATATGAAAAGGATGAATTGATTGATATGTGGATGGCACAAGGCTTCCTTGAAAATAAAGACGAGGCACACTGTCTAGAAGACGTGGGTGAAGAGTATGTTCGTGTTTTATTGATGAAGTCATTCTTGCAAGATGTTAAGACGGATGAATCAGAAGAAATAAAATATTTTAAAATGCATGATTTGATGCATGACTTGTCCCAATCAGTTGCTGCTAGCTTTGACATATACATTGAGGGAGGAAAAGACGTTCCAAGGTGTCCTAGACATGCTCTTTCTAAAAACTATGACTCCAGTAGGTTACTAAATGTGCTGAATCTAGGTAGATTGAGAACCTTTCATGAAATGAAGAAAACATATGGAAGGGATCAAACCAATTTATTTGTGTTAAAATGCTTACGGAGTCTAGATTTGTCAAACTGTGGGATGAGATATTTGTCTAAATCAATAGGTAAAATGATCCATTTGAGGCATCTTAATCTTTATCGTTGTTACCATTTGACTTGTTTGCCCAAGAGTTTTGGTAACTTAGTCAATTTACAAACATTTAGATTGACCCGCTGTGTTAATTTGAAATTTTCTGGAGATATTATCACGAAGTTGGTAAAGTTGCGCCGCCTTGATATACTAGGTTGCAAGGCCTTTGATGATGGAATGCCTATGGGGTTGGGCAAGATGACTTGTATGCAGAGGTTGTCACATTTCATAGTAGGTAATGATGATAAGGAGATAAAGAAAGCCAAATTGAATGAATTGAAAGATCTTGACCTCAAAGGTAGATTAGCCATCAACAAACTTGATTCAGTAAGGGATGTAGAGGAGGAGTCCAAAAATATTAATTTGAAAACAAAGAAAAACCTCATTTCCTTGTCCCTGGATTGGGGAGACGATCCCAAGATGGAAAAAAGTGATGCCATGCAGTTACTAGAAAATCTTCACCCTCATCAAAATTTGAAGACACTAGAAATAAACCGGTACCCTGGGGTATGTCTATCTGATTGGCTTTTGTCATGTGCAAATCTTGTACAATTAGAGTTTTTTGAATCCAAAAATTGTCAATACTTGCCAGCGTTAGAAGGCTTTGTTTCTCTCAAGACTCTTCACATAGAGGGGATGGATAAATTGGAGTGCATATACTATAAAGGATGTTCATCATCAGCCAACTTCTTCCCATCTTTGGTGCAATTAACAATTGACACCTGTAGAAGTTTAAGGGGATGGCAAAGGGAGGCAAATGTCCAAAATACAAGAGATAACGAGTGGCATGATTCACTGCCTCCATTTTCACATCTTTCAGCATTGGAAATTCGTAACTGCCCAAACTTAAGATGCATGCCTACTTTTCCAAATCTCGCGAGGCATTTGGAATTAATCAACTCCAGCATAAAGCCATTGGTAGACACATTAAGAGTGAGCACAATTGGGCCGTCAACATCACATGATATGACTCCATCTCTTTCCATGCTCAAGTCTCTTCACATTGGACGGATAGAAATGGAAGCATTACCAGAGTATGTTGATGAAGATTATAACATGCAGTGCCAAGACCTTTGTTGCCTACATTCTCTCCAAACAATCGAATTTGTTTGTTGTGATCACCTCATGGCTTTACCAGAGTGGATTTGTGATCTCCAATCACTACGAGTTATAGAGATTTGGTTTTGTGCAAACTTGAAGTCATTTCCAGCCGAAATGTCTTGCCTCACTAATTTACAAACACTACGGCTGGATAGATGTTCTCTACTTTTAAAGGAAATATGCCAGAAACGTACAGGAGCAGAGTGGCTAAAAATTCATCACATCCCAAATATATTGATCGATGGGTGTCAAAGCTAA 2730 0.3832 MSKLNLDGRVVEMKHEKSNWRETSSSVLQEEMVGREGNKKDIIDLLLNDDNSHQNVSLVAIVGIGGLGKTALAQLVYNDADVERSFHKRIWVCVSQGSDVNVLVKLMLESLLKKEEKDNQGRELLENKLKLHLDGQKFLLVLDDIWDDFPRKWEELKKVLMCGAEGSQILLTTRDQAIVKRMGIKTPYLLEGLNNDQSWTLLKRLAFDDDKIMTPNLESVGQKIAEKCKGVPLAVRVMGGLLRSKLRETDWEDLLKRDFWKPHDNNDLIMPILKLSYDSLATELKQCFAYCSLYPKDWEYEKDELIDMWMAQGFLENKDEAHCLEDVGEEYVRVLLMKSFLQDVKTDESEEIKYFKMHDLMHDLSQSVAASFDIYIEGGKDVPRCPRHALSKNYDSSRLLNVLNLGRLRTFHEMKKTYGRDQTNLFVLKCLRSLDLSNCGMRYLSKSIGKMIHLRHLNLYRCYHLTCLPKSFGNLVNLQTFRLTRCVNLKFSGDIITKLVKLRRLDILGCKAFDDGMPMGLGKMTCMQRLSHFIVGNDDKEIKKAKLNELKDLDLKGRLAINKLDSVRDVEEESKNINLKTKKNLISLSLDWGDDPKMEKSDAMQLLENLHPHQNLKTLEINRYPGVCLSDWLLSCANLVQLEFFESKNCQYLPALEGFVSLKTLHIEGMDKLECIYYKGCSSSANFFPSLVQLTIDTCRSLRGWQREANVQNTRDNEWHDSLPPFSHLSALEIRNCPNLRCMPTFPNLARHLELINSSIKPLVDTLRVSTIGPSTSHDMTPSLSMLKSLHIGRIEMEALPEYVDEDYNMQCQDLCCLHSLQTIEFVCCDHLMALPEWICDLQSLRVIEIWFCANLKSFPAEMSCLTNLQTLRLDRCSLLLKEICQKRTGAEWLKIHHIPNILIDGCQS 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4789g00049 909 Gene3D - 12 187 IPR027417 -
Pral4789g00049 909 FunFam Probable disease resistance protein At1g61300 14 187 - -
Pral4789g00049 909 Gene3D Ribonuclease Inhibitor 774 891 IPR032675 -
Pral4789g00049 909 PRINTS Disease resistance protein signature 228 242 - -
Pral4789g00049 909 PRINTS Disease resistance protein signature 426 442 - -
Pral4789g00049 909 PRINTS Disease resistance protein signature 132 146 - -
Pral4789g00049 909 PRINTS Disease resistance protein signature 58 73 - -
Pral4789g00049 909 PANTHER DISEASE RESISTANCE PROTEIN RP 26 737 IPR044974 GO:0006952
Pral4789g00049 909 Gene3D - 277 368 IPR036388 -
Pral4789g00049 909 Gene3D Ribonuclease Inhibitor 388 540 IPR032675 -
Pral4789g00049 909 Gene3D Ribonuclease Inhibitor 541 761 IPR032675 -
Pral4789g00049 909 Pfam NB-ARC domain 36 278 IPR002182 GO:0043531
Pral4789g00049 909 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 291 IPR027417 -
Pral4789g00049 909 SUPERFAMILY L domain-like 356 903 - -
Pral4789g00049 909 Gene3D - 192 276 IPR042197 -
Pral4789g00049 909 FunFam Probable disease resistance protein At1g63360 277 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4789g00049 Pral-Chr4789 286213 291192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4789g00049 55 479 WRKY Transcription Factor Family AT5G45050 22.692 5.14e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4789g00049 - - pcin:129288884 926.776