Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4789g00037 ATGAAGCATGAGAAGAGTAACTGGAGGGAAACTAGTTCTTCTGTGCTCCAAGAGGAGATGGTTGGCAGGGAGGGAAACAAGAAGGACATAATTGATTTGTTGTTGAATGATGATAATAGCCATCAAAATGTTTCCTTGGTTGCTATTGTCGGCATTGGGGGTTTGGGTAAAACTGCTCTTGCCCAGTTGGTGTACAACGATGCTGACGTGGAGCGTTCTTTCCACAAGCGAATTTGGGTGTGTGTTTCTCAAGGCTCTGATGTAAATGTGCTTGTTAAACTGATGCTAGAATCATTACTTAAAAAGGAAGAAAAAGATAATCAAGGACGAGAGTTGCTTGAAAATAAGCTTAAACTACATTTAGATGGCCAAAAATTTTTGCTAGTTTTAGATGATATTTGGGATGATTTTCCCAGAAAGTGGGAAGAGTTGAAGAAGGTTTTGATGTGTGGTGCTGAGGGTAGCCAGATTTTGTTGACTACACGTGATCAAGCGATAGTCAAGAGAATGGGTATAAAAACGCCATATCTTTTGGAAGGATTGAACAATGACCAATCTTGGACTTTGTTGAAAAGATTGGCATTTGACGATGATAAAATAATGACCCCAAATCTGGAGTCTGTTGGCCAAAAAATTGCAGAAAAATGTAAGGGTGTTCCGCTGGCAGTAAGAGTTATGGGAGGTTTGTTGCGATCAAAATTGCGGGAAACTGACTGGGAAGATCTCTTGAAACGTGACTTTTGGAAGCCACATGACAATAATGATTTAATTATGCCAATTTTAAAGTTGAGTTATGACAGTCTAGCAACTGAATTAAAACAGTGTTTTGCTTATTGTTCTTTATATCCAAAAGATTGGGAATATGAAAAGGATGAATTGATTGATATGTGGATGGCACAAGGCTTCCTTGAAAATAAAGACGAGGCACACTGTCTAGAAGACGTGGGTGAAGAGTATGTTCGTGTTTTATTGATGAAGTCATTCTTGCAAGATGTTAAGACGGATGAATCAGAAGAAATAAAATATTTTAAAATGCATGATTTGATGCATGACTTGTCCCAATCAGTTGCTGCTAGCTTTGACATATACATTGAGGGAGGAAAAGACGTTCCAAGGTGTCCTAGACATGCTCTTTCTAAAAACTATGACTCCAGTAGGTTACTAAATGTGCTGAATCTAGGTAGATTGAGAACCTTTCATGAAATGAAGAAAACATATGGAAGGGATCAAACCAATTTATTTGTGTTAAAATGCTTACGGAGTCTAGATTTGTCAAACTGTGGGATGAGATATTTGTCTAAATCAATAGGTAAAATGATCCATTTGAGGCATCTTAATCTTTATCGTTGTTACCATTTGACTTGTTTGCCCAAGAGTTTTGGTAACTTAGTCAATTTACAAACATTTAGATTGACCCGCTGTGTTAATTTGAAATTTTCTGGAGATATTATCACGAAGTTGGTAAAGTTGCGCCGCCTTGATATACTAGGTTGCAAGGCCTTTGATGATGGAATGCCTATGGGGTTGGGCAAGATGACTTGTATGCAGAGGTTGTCACATTTCATAGTAGGTAATGATGATAAGGAGATAAAGAAAGCCAAATTGAATGAATTGAAAGATCTTGACCTCAAAGGTAGATTAGCCATCAACAAACTTGATTCAGTAAGGGATGTAGAGGAGGAGTCCAAAAATATTAATTTGAAAACAAAGAAAAACCTCATTTCCTTGTCCCTGGATTGGGGAGACGATCCCAAGATGGAAAAAAGTGATGCCATGCAGTTACTAGAAAATCTTCACCCTCATCAAAATTTGAAGACACTAGAAATAAACCGGTACCCTGGGGTATGTCTATCTGATTGGCTTTTGTCATGTGCAAATCTTGTACAATTAGAGTTTTTTGAATCCAAAAATTGTCAATACTTGCCAGCGTTAGAAGGCTTTGTTTCTCTCAAGACTCTTCACATAGAGGGGATGGATAAATTGGAGTGCATATACTATAAAGGATGTTCATCATCAGCCAACTTCTTCCCATCTTTGGTGCAATTAACAATTGACACCTGTAGAAGTTTAAGGGGATGGCAAAGGGAGGCAAATGTCCAAAATACAAGAGATAACGAGTGGCATGATTCACTGCCTCCATTTTCACATCTTTCAGCATTGGAAATTCGTAACTGCCCAAACTTAAGATGCATGCCTACTTTTCCAAATCTCGCGAGGCATTTGGAATTAATCAACTCCAGCATAAAGCCATTGGTAGACACATTAAGAGTGAGCACAATTGGGCCGTCAACATCACATGATATGACTCCATCTCTTTCCATGCTCAAGTCTCTTCACATTGGACGGATAGAAATGGAAGCATTACCAGAGGAATGGATGCAAAATCTCTCCTCTCTTAAACATCTCTATATTGTGGGATTTTCAAGTCTAGAGAAACCATTTCTTCATATGCAAAATCTATCTGCCACACTCGAAAAATTGAGTATTTTCAAACTTGATTCACAGTATGTTGATGAAGATTATAACATGCAGTGCCAAGACCTTTGTTGCCTACATTCTCTCCAAACAATCGAATTTGTTTGTTGTGATCACCTCATGGCTTTACCAGAGTGGATTTGTGATCTCCAATCACTACGAGTTATAGAGATTTGGTTTTGTGCAAACTTGAAGTCATTTCCAGCCGAAATGTCTTGCCTCACTAATTTACAAACACTACGGCTGGATAGATGTTCTCTACTTTTAAAGGAAATATGCCAGAAACGTACAGGAGCAGAGTGGCTAAAAATTCATCACATCCCAAATATATTGATCGATGGGTGTCAAAGCTAA 2829 0.3821 MKHEKSNWRETSSSVLQEEMVGREGNKKDIIDLLLNDDNSHQNVSLVAIVGIGGLGKTALAQLVYNDADVERSFHKRIWVCVSQGSDVNVLVKLMLESLLKKEEKDNQGRELLENKLKLHLDGQKFLLVLDDIWDDFPRKWEELKKVLMCGAEGSQILLTTRDQAIVKRMGIKTPYLLEGLNNDQSWTLLKRLAFDDDKIMTPNLESVGQKIAEKCKGVPLAVRVMGGLLRSKLRETDWEDLLKRDFWKPHDNNDLIMPILKLSYDSLATELKQCFAYCSLYPKDWEYEKDELIDMWMAQGFLENKDEAHCLEDVGEEYVRVLLMKSFLQDVKTDESEEIKYFKMHDLMHDLSQSVAASFDIYIEGGKDVPRCPRHALSKNYDSSRLLNVLNLGRLRTFHEMKKTYGRDQTNLFVLKCLRSLDLSNCGMRYLSKSIGKMIHLRHLNLYRCYHLTCLPKSFGNLVNLQTFRLTRCVNLKFSGDIITKLVKLRRLDILGCKAFDDGMPMGLGKMTCMQRLSHFIVGNDDKEIKKAKLNELKDLDLKGRLAINKLDSVRDVEEESKNINLKTKKNLISLSLDWGDDPKMEKSDAMQLLENLHPHQNLKTLEINRYPGVCLSDWLLSCANLVQLEFFESKNCQYLPALEGFVSLKTLHIEGMDKLECIYYKGCSSSANFFPSLVQLTIDTCRSLRGWQREANVQNTRDNEWHDSLPPFSHLSALEIRNCPNLRCMPTFPNLARHLELINSSIKPLVDTLRVSTIGPSTSHDMTPSLSMLKSLHIGRIEMEALPEEWMQNLSSLKHLYIVGFSSLEKPFLHMQNLSATLEKLSIFKLDSQYVDEDYNMQCQDLCCLHSLQTIEFVCCDHLMALPEWICDLQSLRVIEIWFCANLKSFPAEMSCLTNLQTLRLDRCSLLLKEICQKRTGAEWLKIHHIPNILIDGCQS 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4789g00037 942 PRINTS Disease resistance protein signature 120 134 - -
Pral4789g00037 942 PRINTS Disease resistance protein signature 46 61 - -
Pral4789g00037 942 PRINTS Disease resistance protein signature 414 430 - -
Pral4789g00037 942 PRINTS Disease resistance protein signature 216 230 - -
Pral4789g00037 942 Pfam NB-ARC domain 24 266 IPR002182 GO:0043531
Pral4789g00037 942 Gene3D - 180 264 IPR042197 -
Pral4789g00037 942 SUPERFAMILY L domain-like 344 743 - -
Pral4789g00037 942 Gene3D - 265 356 IPR036388 -
Pral4789g00037 942 FunFam Probable disease resistance protein At1g63360 265 355 - -
Pral4789g00037 942 Gene3D Ribonuclease Inhibitor 525 748 IPR032675 -
Pral4789g00037 942 Gene3D Ribonuclease Inhibitor 376 524 IPR032675 -
Pral4789g00037 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 279 IPR027417 -
Pral4789g00037 942 Gene3D - 3 175 IPR027417 -
Pral4789g00037 942 PANTHER DISEASE RESISTANCE PROTEIN RP 17 695 IPR044974 GO:0006952
Pral4789g00037 942 SUPERFAMILY RNI-like 710 914 - -
Pral4789g00037 942 FunFam Probable disease resistance protein At1g61300 2 175 - -
Pral4789g00037 942 Gene3D Ribonuclease Inhibitor 749 940 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4789g00037 Pral-Chr4789 285788 291192 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4789g00037 43 467 WRKY Transcription Factor Family AT5G45050 22.692 5.49e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4789g00037 - - pcin:129289506 929.858