Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4789g00034 ATGGCGGAACAAGTACCATATGGAGTGGCCACAAGTCTCATCAACACGTTGGCTTCTGCAGCCTTCAGAGAGATTGCTTCCATTTATGGGGTCAAAAGGGACACTGAATGGCTCAAGAAAACTGTTGAACGCATCAAAGCTGCGCTTGCCGATGCTGACCAGAAGCAGCAGAATGAACAACTCGTCCAGCTCTGGATCAGGGACCTCAAGCAAGTGCTTTACGATGCAGATGACTTGCTCGATGAGATCCACACTCAACATTTGCTGCGCAAGAGGGATGCAAAAGGAAAGGTACGTGACTTCTTCTCATCCTCCAATCCAATCGCTTTTCGCTCCAAAATTGCTCCCAAGATTAGAAGCATTAAAGAGCAATTTAATGCTGTTAATAAAGGAATGTCGGAGCTGAATTTAGATCGAAGAGTTGTTGAAACGAAGCATGAAAAGAGGAACTGGAGGGAAACTAGTTCTTTTGTGCTCCAAGAGGATATGGTTGGTAGGGAGGTAAACAAGAAGGACATAATTGATTTGTTGTTGAATGATGATAATAGCCATCAAAATGTTTCTTTGGTTGCTATTGTCGGCATTGGGGGTTTGGGTAAAACTGCTCTTGCCCAGTTGGTGTACAACGGTGCTGACGTGGAGCGTTCTTTCCACAAGCGAATGTGGGTGTGTGTTTCTCAAGGCTCTGATGTAAAAGTGCTTGTTAAGCTGATGCTAGAATCATTACTTAAAAAAGAACAAAAAGATAATCAAGGACTAGAATTGCTTCAAAATAAGCTTAAATCACATTTAGATGGCCAAAATTTTTTGCTAGTTTTAGATGATATTTGGGATGATTTTCCCAGAGAGTGGGAAGAGTTGAAGAAGATTTTGATGTGTGGTGTTAAGGGTAGTAAGATTTTGTTGACTACACGTGATCAAGCGGTAGTCAATAGAATGGGTATAAAAACGCCATATCATTTGGAAGGATTGAACAATGACCAGTCTTGGACTCTGTTGAAAAGGTTGGCATTTGACGATGATAAAATAATGACCCAAAATTTGGAGTCTATTGGCCAAAAAATTGCAGCAAAATGTAAGGGCGTTCCACTGGCAATAAGAGTGATGGGAAGTTTGTTGCGCTCAAAATCGCGGGAAAGTGAATGGGAAGATCTGTTGAAAGGTAACTTTTGGAAGCTACGTGATGATAATAATTCAATTATGCCAATTTTAAAGTTGAGTTATGACAGTCTGGCAATTGAATTAAAACAGTGTTTTGCTTATTGTTCTATATATCCAAAAGATTGGGAATATGATAAGGCTGAATTGATTGATATGTGGATGGCACAAGGCTTCCTTGAAAACAAAGACGAGGAACAATGTCTAGAAGACGTGGGTGAAGAGTACGTTCATGTTTTATTGATGAAGTCATTCTTGCAAGATGTTAAGATTGATGAATCAGGAGAAATAACGTATTTTAAAATGCATGATTTGATGCATGACTTGTCCCAATCAGTTGCTAGCTCTGACCTATACGTTGAGGGAGGAAAAAATGGTGCAATGTGTCCTATACATGCTTCTTTTGAAAAATATAACACCAATCGTTCACTAAATATGCCGGATCTAGGTAGATTGAGAACGTTTCATGAAATGAAGAAAGAATATAGAAGAGATCTACCCGATTTATTTGTGTTCAAACGCTTACGAAGTCTAGATTTGTCATACTCTATGATGAGATATTTGCCTAAATCAATAGGTAAAATGATCCATTTGAGGCATCTTAATCTCTCTTATTGTGATGAATTGACTAGTTTGCCCAAGAGTATAAGTAAATTAGTCAATTTGCAAACATTAAGATTGACCAACTGTCATCGTTTGAAATTTCCTGGAGATATTATCACAAAGTTTGTAAAGTTGCGCCGGCTTGATATAGGAGGTTGCAAGGCCTTTGATGATGGAATGCCTATGGGGTTGGGCAAAATGACTTGTATGCAGAGGTTGTCATATTTCATAGTGGGTAATGGTGATAAGGAGACAAAGAAAGCCAAATTGAATGAATTGAAAGATGTTGACCTCAAAGGTAGATTAGCCATCAACAAACTTGATTCAGTAAGGGATGTAGAGGAGGAGTCCAAAAATATTAATTTGAAAACAAAGAAAAACCTCATTTCCTTGTCCCTGGATTGGGGAGACGATCGCAAGATGGAAAAAAGTGATGCCATGCAGTTACTAGAAAATCTTCACCCTCATCAAAATTTGAAGACACTAGAAATAAACCGATACCCGGGGGCATGCCTATCTGATTGGCTCTTGTCATGTGCAAATCTTGTTCAATTAACGTTTTTGAACGTCAAAAATTGTCAATACTTGCCAGCGTTGGAAGGCTTTGTTTCTCTCAAGACTCTTCACATAGACGGGATGGATAAATTGGAGCATATAGAATATAAAGGATGTTCCTCATCAGCCAACTTCTTCCCATCTTTGGAGAAATTAGAAATTTACTCTTGTGGAAGTTTAAAGGGATGGCAAAGGGAGGCAAATGGCCAAAATACAAGAAATAATGAGTGGCATGATTCACTGCCTCCATTTTCACATCTTTCAGCATTGGAAATTTGTAACTGCCCAAACTTAAGATGCATGCCTGCTTTTCCAAATCTCGTGAGGGATTTGGGGTTATTCAACTCTAGCATGAAGCCATTGGTAGACACATTAAGTGTGGGCACAATTGGGCCGTCAACATCACATGATATGACTCCATCTCTTTCCATGCTCAAGTCTCTTGACATTAGAAGGATAGAAATGGAAGCATTACCAGAGGAATGTATGCAAAATCTCTCCTCTCTTAAACATCTCTCTATTGATGGATTTTCGGAGAAACCATTTCTTCATATGCGGAATCTATCCGCTACACTCGAGAGCTTTACCCGAGTGGATTTGTGA 2919 0.3929 MAEQVPYGVATSLINTLASAAFREIASIYGVKRDTEWLKKTVERIKAALADADQKQQNEQLVQLWIRDLKQVLYDADDLLDEIHTQHLLRKRDAKGKVRDFFSSSNPIAFRSKIAPKIRSIKEQFNAVNKGMSELNLDRRVVETKHEKRNWRETSSFVLQEDMVGREVNKKDIIDLLLNDDNSHQNVSLVAIVGIGGLGKTALAQLVYNGADVERSFHKRMWVCVSQGSDVKVLVKLMLESLLKKEQKDNQGLELLQNKLKSHLDGQNFLLVLDDIWDDFPREWEELKKILMCGVKGSKILLTTRDQAVVNRMGIKTPYHLEGLNNDQSWTLLKRLAFDDDKIMTQNLESIGQKIAAKCKGVPLAIRVMGSLLRSKSRESEWEDLLKGNFWKLRDDNNSIMPILKLSYDSLAIELKQCFAYCSIYPKDWEYDKAELIDMWMAQGFLENKDEEQCLEDVGEEYVHVLLMKSFLQDVKIDESGEITYFKMHDLMHDLSQSVASSDLYVEGGKNGAMCPIHASFEKYNTNRSLNMPDLGRLRTFHEMKKEYRRDLPDLFVFKRLRSLDLSYSMMRYLPKSIGKMIHLRHLNLSYCDELTSLPKSISKLVNLQTLRLTNCHRLKFPGDIITKFVKLRRLDIGGCKAFDDGMPMGLGKMTCMQRLSYFIVGNGDKETKKAKLNELKDVDLKGRLAINKLDSVRDVEEESKNINLKTKKNLISLSLDWGDDRKMEKSDAMQLLENLHPHQNLKTLEINRYPGACLSDWLLSCANLVQLTFLNVKNCQYLPALEGFVSLKTLHIDGMDKLEHIEYKGCSSSANFFPSLEKLEIYSCGSLKGWQREANGQNTRNNEWHDSLPPFSHLSALEICNCPNLRCMPAFPNLVRDLGLFNSSMKPLVDTLSVGTIGPSTSHDMTPSLSMLKSLDIRRIEMEALPEECMQNLSSLKHLSIDGFSEKPFLHMRNLSATLESFTRVDL 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4789g00034 972 Gene3D Ribonuclease Inhibitor 516 674 IPR032675 -
Pral4789g00034 972 Gene3D Ribonuclease Inhibitor 675 889 IPR032675 -
Pral4789g00034 972 CDD RX-CC_like 7 124 IPR038005 -
Pral4789g00034 972 Gene3D - 408 499 IPR036388 -
Pral4789g00034 972 Pfam Rx N-terminal domain 11 95 IPR041118 -
Pral4789g00034 972 SUPERFAMILY L domain-like 487 950 - -
Pral4789g00034 972 FunFam Probable disease resistance protein At1g63360 408 498 - -
Pral4789g00034 972 Pfam NB-ARC domain 169 409 IPR002182 GO:0043531
Pral4789g00034 972 PANTHER DISEASE RESISTANCE PROTEIN RP 49 867 IPR044974 GO:0006952
Pral4789g00034 972 Gene3D - 323 407 IPR042197 -
Pral4789g00034 972 Gene3D - 144 317 IPR027417 -
Pral4789g00034 972 FunFam Probable disease resistance protein At1g61300 145 318 - -
Pral4789g00034 972 Coils Coil 38 58 - -
Pral4789g00034 972 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 422 IPR027417 -
Pral4789g00034 972 Gene3D - 10 119 - -
Pral4789g00034 972 PRINTS Disease resistance protein signature 189 204 - -
Pral4789g00034 972 PRINTS Disease resistance protein signature 359 373 - -
Pral4789g00034 972 PRINTS Disease resistance protein signature 603 619 - -
Pral4789g00034 972 PRINTS Disease resistance protein signature 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4789g00034 Pral-Chr4789 264248 267276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4789g00034 186 499 WRKY Transcription Factor Family AT5G45050 26.562 1.01e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4789g00034 - - pcin:129288884 1092.41