Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4789g00033 ATGGCGGAACAAGTACCATATGGAGTGACCACAAGTCTCATCAACACGTTGGCTTCTGTAGCCTTCAGAGAGATTGCTTCCATCTATGGGGTCAAAAGGGACACTGAATGGCTCAAGAAAACTGTTGAAGGCATCAAAGCTGTGTTGGCTGATGCTGACCGAAAGCAGCACACTGACCAACTCATCCAGCTCTGGATCAGAGACCTCAAGCAAGTGCTTTACGATGCAGATGACGTGCTCGATGAGATCCATACTCAGCATTTGCTGCGCCACAGGGATGCAAAGGGAAAGGGAAGGGGAAAGGTACGTGAATTCTTCTCATCCTCCAACCCAATTGCCCTTCGCCTCCAAATTGCTCACAAGATTAGAAACATTAGAGTGCAATTTAATGATGTTGCTGAAAGTATGTCGAAATTGAATTTAGTTGGAAGAGTTCTTGAAATGAAGCGTGAAAAGAGTAACTGGAGGGAAACTAGTTCTTTTGTGCTCCAAGAGGATATGGTTGGTAGGGAGGGAAACAAGAGGGACATAATTGATTTGTTGTTGAATGATGATAATAGCCATCAAAATGTTTCTTTGGTTGCTATTGTCGGCATTGGGGGTTTGGGGAAAACCACTCTTGCCCAGCTGGTGTACAATGATGCTGACGTGGAGCGTTCTTTCCACAAGCGAATTTGGGTGTGTGTTTCCGAAGACTCTGATGTAAAGGCGATTGTGAAACAGACACTCGAATTACTACTTGGCGAAAAACAGGACGATCAACCATTAGAACTACTTCAAAATAAGCTTCAACAAAATTTAGCAGGCCAAAAATTTTTGCTAGTTTTAGATGATATTTGGGATGATTTTCCTAGAAAGTGGGAAGAGTTGAAGAAGTTTTTGATGCGCGGTGCTGAGGGTAGTAAGATTTTGTTGACTACACGTGATCAAGTAGTAGTCAATAGAATGGGTGTAAAAACGCCGTATCTTTTGGAAGGATTGAACAGTGACCAATCTTGGACTCTGTTGAAAAGATTGGCATTTGACGATGATAAAAAAATAACCCCAAATCTGGAGTCTGTTGGCCAAAAAATTGCAGAAAAATGTATGGGGGTTCCGCTGGCAATAAGAGTTATGGGAGGTTTGTTGCGATCAAAATTGCTAGAAAGTGACTGGGAAGATCTCTTGAAAGGTGACTTTTGGAAGCTAAGTGATAATAATGATTTAATCATGCCAATTTTAAAGTTGAGTTATGACGGTTTGGCAATTGAATTAAAACAGTGTTTTGCTTATTGTTCTTTGTATCCAAAAGATTGGAAATATGAAAAGGATGAATTGATTGATATGTGGATGGCACAAGGCTTCCTTAAAAATAAAGACGAGGAACAATGTTTAGAAGATGTGGGTGAAGAGTACGTTCGTATTTTGTTGATGAAGTCATTCTTGCAAGATGTTGAGATGGATGAATTAGGAGAAATAGAATATTTTAAAATGCATGATTTGATGCATGACTTGTCCCAATCATTTGCTACTAGCTTTGACATATACATTGAGGGAGGAAAAGACGTTCCAAGGTGTCCTAGACATGCTCTTTTTAAAACCTATGACACCAATAGTTCACTAAATGTGCCGGATCTAGGTAGATTGAGAAACTTTCGTGAAATGAAGAAAAATTATAGAAGGGATCCATCTGATTTATTTGTGTTAAAATGCTTACGAAGTCTAGATTTGTCATACCAATCGATAAAATATTTTCCCAAATCAATAGGTAAAATAAGCCATTTGAGGCATCTTAATCTCGATTATTGTCATCAATTGACTTGTTTGCCCAAGAGTATAAGTAACTTGGTCAATTTGCAAACATTGAGATTGACTGGCTGTGAGAATTTGAAATTTCCTGGAGATATTATCACAAAGTTTGTAAAGTTGCGCCGGCTTGATATACTAGGTTGCAAGGCCTTTGTTGATGGAATGCCTATGGGGTTGGACAAAATGACTTGTATGCAGAGGTTGTCACATTTCATAGTGGGTAATGATGATAAGGAGAGAAAGAAAGCCAAATTGAACGAATTGAAAGATCTTAACCTCAGAGGTAGATTAGCCATTAAAAAACTAGATTCAGTAAGGGATGTAGAGGAGGAGTCTAAGAATGTTAATTTGAGAACAAAGAAAAACCTCATTTCCTTGTCCCTGCATTGGGGAGATGACCCAAAGATGGAAAAAAGTGATGCCATGCAATTACTGGAAAATCTTCACCCTCATCAAAATTTGAAGACACTAGGAATACAAAGATACCCTGGGGTATGCCTATCTGATTGGCTTTTGTCATGTGTAAATCTTGTTCAATTGGAGTTTTTTGGATTCAACAATTGTCAATACTTGCCAGCGTTAGAAGGCTTTGTTTCTCTCAAGACTCTTTACATAGGGCGTATGGATAAATTGGAGTGCATATACTATAAAGGATGTTCCTCATCAGCCAACTTCTTCCCATCTTTGGAGGAATTAGCAATTTACTTGTGTGGAAGTTTAAGGGGATGGCAAAGGGAGGCAAATGGCCAAAATACAAGAGATAATGAGTGGCATGATTCACTGCCTCCATTTTCACGTCTTTCAGCATTGACAATTCGTGATTGCCCAGACTTAAGATTCATGCTTACTTTTCCAAATCTCGTGAGGCATTTGAATTTAGTCAACTCCAGCATGAAGCCATTGGTAGACACATTAAGTGTGAGCGCAATTGGGCCGTCAACATCACATGATATGACTCCATCTCTTTCCATGCTCAAGTCTCTTCACATTGCAGGGATAGAAATGGAAGCATCACCAGAGGAATGGATGCAAAATCTCTCCTCTCTTAAACATCTCTCCATTCAGGGATTTTCAGAGAAACCATTTCTTCATATGCGGAATCTATCTGCTACACTCGAGATATTGACTATTTTCGAACTTGGTGATGAGGATTATAGCATACAGTGCCAAGACCTTTGTTGCCTACGTTCTCTCCAAACAATCGAATTTGTTTGTTGTGATCACCTCACAGCTTTACCCGAGTGGATTTGTGATCTCCAGTCACTGCGAATTGTGCGCATTGTGAGTTGTAAAAACTTGGAGTTATTTCCAGCAGAAATGTCTCGCCTCACTACTTTACAAACACTAGAACTCTCTGGAGCTCCACTTCTAGAGGACAAATGCAAGAGAGAAACAGGAGCAGAGTGGCCAAAAATTGCTCGCATCCCAAATATACGGATCAATTGGTGTCGAATCTAA 3246 0.3977 MAEQVPYGVTTSLINTLASVAFREIASIYGVKRDTEWLKKTVEGIKAVLADADRKQHTDQLIQLWIRDLKQVLYDADDVLDEIHTQHLLRHRDAKGKGRGKVREFFSSSNPIALRLQIAHKIRNIRVQFNDVAESMSKLNLVGRVLEMKREKSNWRETSSFVLQEDMVGREGNKRDIIDLLLNDDNSHQNVSLVAIVGIGGLGKTTLAQLVYNDADVERSFHKRIWVCVSEDSDVKAIVKQTLELLLGEKQDDQPLELLQNKLQQNLAGQKFLLVLDDIWDDFPRKWEELKKFLMRGAEGSKILLTTRDQVVVNRMGVKTPYLLEGLNSDQSWTLLKRLAFDDDKKITPNLESVGQKIAEKCMGVPLAIRVMGGLLRSKLLESDWEDLLKGDFWKLSDNNDLIMPILKLSYDGLAIELKQCFAYCSLYPKDWKYEKDELIDMWMAQGFLKNKDEEQCLEDVGEEYVRILLMKSFLQDVEMDELGEIEYFKMHDLMHDLSQSFATSFDIYIEGGKDVPRCPRHALFKTYDTNSSLNVPDLGRLRNFREMKKNYRRDPSDLFVLKCLRSLDLSYQSIKYFPKSIGKISHLRHLNLDYCHQLTCLPKSISNLVNLQTLRLTGCENLKFPGDIITKFVKLRRLDILGCKAFVDGMPMGLDKMTCMQRLSHFIVGNDDKERKKAKLNELKDLNLRGRLAIKKLDSVRDVEEESKNVNLRTKKNLISLSLHWGDDPKMEKSDAMQLLENLHPHQNLKTLGIQRYPGVCLSDWLLSCVNLVQLEFFGFNNCQYLPALEGFVSLKTLYIGRMDKLECIYYKGCSSSANFFPSLEELAIYLCGSLRGWQREANGQNTRDNEWHDSLPPFSRLSALTIRDCPDLRFMLTFPNLVRHLNLVNSSMKPLVDTLSVSAIGPSTSHDMTPSLSMLKSLHIAGIEMEASPEEWMQNLSSLKHLSIQGFSEKPFLHMRNLSATLEILTIFELGDEDYSIQCQDLCCLRSLQTIEFVCCDHLTALPEWICDLQSLRIVRIVSCKNLELFPAEMSRLTTLQTLELSGAPLLEDKCKRETGAEWPKIARIPNIRINWCRI 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4789g00033 1081 CDD RX-CC_like 7 134 IPR038005 -
Pral4789g00033 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 425 IPR027417 -
Pral4789g00033 1081 Gene3D - 411 501 IPR036388 -
Pral4789g00033 1081 Gene3D - 150 320 IPR027417 -
Pral4789g00033 1081 SUPERFAMILY L domain-like 490 874 - -
Pral4789g00033 1081 SUPERFAMILY RNI-like 857 1054 - -
Pral4789g00033 1081 FunFam Probable disease resistance protein At1g61300 149 321 - -
Pral4789g00033 1081 Gene3D Ribonuclease Inhibitor 883 1062 IPR032675 -
Pral4789g00033 1081 Gene3D - 326 410 IPR042197 -
Pral4789g00033 1081 Gene3D Ribonuclease Inhibitor 529 882 IPR032675 -
Pral4789g00033 1081 Pfam Rx N-terminal domain 11 94 IPR041118 -
Pral4789g00033 1081 PRINTS Disease resistance protein signature 266 280 - -
Pral4789g00033 1081 PRINTS Disease resistance protein signature 607 623 - -
Pral4789g00033 1081 PRINTS Disease resistance protein signature 193 208 - -
Pral4789g00033 1081 PRINTS Disease resistance protein signature 362 376 - -
Pral4789g00033 1081 PANTHER DISEASE RESISTANCE PROTEIN RP 49 871 IPR044974 GO:0006952
Pral4789g00033 1081 Gene3D - 10 123 - -
Pral4789g00033 1081 Pfam NB-ARC domain 171 412 IPR002182 GO:0043531
Pral4789g00033 1081 FunFam Probable disease resistance protein At1g63360 411 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4789g00033 Pral-Chr4789 247315 250560 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4789g00033 190 644 WRKY Transcription Factor Family AT5G45050 24.248 1.11e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4789g00033 - - pcin:129289506 1113.21