Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4789g00022 ATGTCGTCCATAAGCATCGGCGATGAGAGCCACTACCTCCAGCGTACGTTACCGGAGTTAGATTTTCGGGACCTGAAGGTCATCTCCGCCGTGGGCCGCGGAGCCAAGGGCGTTGTGTTTGCGGCCAAGAGGAATGACGATGCATTTGGTGAATATTTTGCTTTGAAAGTGATCTCCAAGGCCTTGATTCAGAAGAAAGCGAAGGCGATTGACAACAATGAGGGCGAGTGCAGGAGGGTGTCGTTTGAGCAGCAGGTGCTGCGTCGTTTTGATCATCCTCTCTTGCCTAGGTTGCGAGGGGTTCTGGAAACCGACAAGATCATTGGGTACGCCATCGATTACTGCCCCGGCGGCAATCTCCATTCTCTCCGGAAAAAGCAGACTGAGAAGATGTTTTCCGATGACAGCATAAGGTTTTATGCTGTGGAATTGGTCCTTGCATTGGAGTATCTGCACAATTTGGGCATAGTATACAGAGATTTGAAGCCAGAAAATATACTGATCCAAGAATCTGGTCACATAATGCTCGTCGACTTCGATCTTTCCAAAAAACTAATCCTGAAATCTCCAAAATCCCAGAGTAGCTCCTCGTCGCCGATTTCCCACTCGTCAAAGACGACGGCGATGAAGGACTTACGGAAGAAACGCTTCTTCCGGTTTTACAGTTGCTCCCTGCCAAGCCCCCCGTCGTACGAAACAGAAGCCTCACCGGATTTCCAATGTCCGCGACGGAGCGAGTCGGACTCGGTTGAGAAATCGAACTCGTTCGTTGGTACGGAGGAATACGTAGCTCCCGAAGTCATTTCGGGGAAGGGACATAACTTCGGAGTCGATTGGTGGTCGCTCGGCGTCGTTTTATATGAGATGCTGTACGGAACGACGCCGTTTACCGGTCAGAACAGGAAAGAAACGTTCTATCGGATTTTGACGAAGGAACCGGAGTTAACCGGAGAGAAGACGCCGTTGAGGGACCTGATCGCGAAGTTGCTGGAGAAGGACCGTGACCGTCGGATCGACTTAGAAGGGATCAAGGGCCACGATTTCTTCAAAGGCGTTCAGTGGGACTCCGTTTTACAGGTGGCGCGGCCGCCGTATATTCCGTTGAATGAGGTTGGGGACACAAATGGGTTTAACGAAAAACAAGTGGAGGTATTTGTCCATGAGGTATTTTTTGGAACGGATGGTGAGGAAGAAAAAGGGAAAAAGAAAGAAGAAAATAGTAATTGTAATAATAATAATAATAGCAAGAACGTGTGGGTAGAGAAATTGAGTCAGAGTCACACCGAGAATGAGGATTTTTTAATTTTTTGA 1311 0.4859 MSSISIGDESHYLQRTLPELDFRDLKVISAVGRGAKGVVFAAKRNDDAFGEYFALKVISKALIQKKAKAIDNNEGECRRVSFEQQVLRRFDHPLLPRLRGVLETDKIIGYAIDYCPGGNLHSLRKKQTEKMFSDDSIRFYAVELVLALEYLHNLGIVYRDLKPENILIQESGHIMLVDFDLSKKLILKSPKSQSSSSSPISHSSKTTAMKDLRKKRFFRFYSCSLPSPPSYETEASPDFQCPRRSESDSVEKSNSFVGTEEYVAPEVISGKGHNFGVDWWSLGVVLYEMLYGTTPFTGQNRKETFYRILTKEPELTGEKTPLRDLIAKLLEKDRDRRIDLEGIKGHDFFKGVQWDSVLQVARPPYIPLNEVGDTNGFNEKQVEVFVHEVFFGTDGEEEKGKKKEENSNCNNNNNSKNVWVEKLSQSHTENEDFLIF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4789g00022 436 FunFam Serine/threonine-protein kinase OXI1 251 368 - -
Pral4789g00022 436 Gene3D Phosphorylase Kinase; domain 1 24 118 - -
Pral4789g00022 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Pral4789g00022 436 Gene3D Transferase(Phosphotransferase) domain 1 238 368 - -
Pral4789g00022 436 Gene3D Transferase(Phosphotransferase) domain 1 119 189 - -
Pral4789g00022 436 FunFam Serine/threonine-protein kinase OXI1 119 186 - -
Pral4789g00022 436 MobiDBLite consensus disorder prediction 396 415 - -
Pral4789g00022 436 PANTHER FLIPPASE KINASE 1-RELATED 19 375 - -
Pral4789g00022 436 Pfam Protein kinase domain 250 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4789g00022 436 Pfam Protein kinase domain 27 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4789g00022 436 SMART serkin_6 25 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4789g00022 436 SUPERFAMILY Protein kinase-like (PK-like) 9 380 IPR011009 -
Pral4789g00022 436 ProSiteProfiles Protein kinase domain profile. 25 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4789g00022 436 MobiDBLite consensus disorder prediction 228 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4789g00022 Pral-Chr4789 191241 193025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4789g00022 20 436 AGC Kinase Gene Family AT3G25250 57.311 6.02e-154 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral4789g00022 Pkinase 5.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4789g00022 K20714 - qsa:O6P43_026737 503.056