Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4789g00010 ATGGGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACCGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGACAGCCTGCAAACACTAAGCTGTCAAGTAACAAGACAGTCAGGAGAGTTCGCGTTAGAGGTGGCAATGTGAAATGGAGGGCTTTGCGATTGGATACAGGAAATTATTCATGGGGCAGTGAAGCCGTGACTCGCAAAACACGTATCTTGGATGTGGTTTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAAACCCTTGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCTCCGTTCAAGCAGTGGTACCTTCAGCATTATGGCGTCGATCTTAGTAAGAAGAAGAAAGCAGCTGCCAAGAAGGATTCTACAGAGGAGGGTGAAGCAGCTGCAGCTGCTGCTGCTGAAGAGACAAGGAAAAGTAAACATGTGCTTAGGAAACTAGAGAAGCGGCAGAAAGATCGAAAGCTTGATCCCCACATTGAAGAGCAATTTGGTGGAGGCCGATTGTTGGCTTGCATCTCTTCTCGACCTGGTCAATGTGGCAGAGCTGATGGCTACATATTGGAAGGCAAGGAGTTGGAGTTTTACATGAAGAAACTCCAGAAGAAGAAGGGAAAGAGTGCTGGTGCTGCTTGA 672 0.4792 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDLSKKKKAAAKKDSTEEGEAAAAAAAEETRKSKHVLRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKSAGAA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4789g00010 223 Gene3D Ribosomal protein S8e, subdomain 109 179 IPR042563 -
Pral4789g00010 223 FunFam 40S ribosomal protein S8 32 164 - -
Pral4789g00010 223 MobiDBLite consensus disorder prediction 11 26 - -
Pral4789g00010 223 MobiDBLite consensus disorder prediction 1 41 - -
Pral4789g00010 223 CDD Ribosomal_S8e_like 5 200 - -
Pral4789g00010 223 Pfam Ribosomal protein S8e 5 200 IPR022309 -
Pral4789g00010 223 FunFam 40S ribosomal protein S8 165 218 - -
Pral4789g00010 223 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Pral4789g00010 223 NCBIfam ribosomal protein eS8 1 202 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pral4789g00010 223 Gene3D - 26 216 - -
Pral4789g00010 223 MobiDBLite consensus disorder prediction 129 154 - -
Pral4789g00010 223 FunFam 40S ribosomal protein S8 109 179 - -
Pral4789g00010 223 PANTHER 40S RIBOSOMAL PROTEIN S8 1 218 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pral4789g00010 223 MobiDBLite consensus disorder prediction 129 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4789g00010 Pral-Chr4789 77084 79562 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4789g00010 1 223 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 82.063 1.06e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4789g00010 K02995 - pcin:129288318 369.392