Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4789g00008 ATGGGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACCGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGTCAGCCAGCAAACACTAAGCTGTCGAGTAACAAGACAGTCAGGAGAGTTCGCGTTAGAGGTGGCAATGTGAAATGGAGGGCTTTGCGATTGGATACAGGAAATTATTCGTGGGGTAGTGAAGCCGTGACTCGCAAAACACGTATCTTAGATGTGGTTTACAATGCCTCCAACAATGAGCTTGTGCGAACTCAAACCCTTGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCGCCTTTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATCTTAGTAAGAAGAAGAAAGCAGCTGCCAAGAAGGATTCTACAGAGGAGGGTGAAGCTGCTGCTGCTGCTGCTGCTGCTGAAGAGACCAAGAAAAGCAAACATGTGCTTAGAAAACTAGAGAAGCGGCAGAAAGATCGAAAGCTTGATTCCCACATTGAAGAGCAATTTGGTGGTGGCCGATTATTGGCTTGCATTTCTTCTCGACCTGGTCAATGTGGCAGAGCTGATGGCTACATATTGGAAGGCAAGGAATTGGAGTTTTACATGAAGAAACTCCAGAAGAAGAAGGGAAAGGGTGCTGCTTGA 669 0.4723 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDLSKKKKAAAKKDSTEEGEAAAAAAAAEETKKSKHVLRKLEKRQKDRKLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4789g00008 222 MobiDBLite consensus disorder prediction 1 42 - -
Pral4789g00008 222 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Pral4789g00008 222 Gene3D Ribosomal protein S8e, subdomain 109 180 IPR042563 -
Pral4789g00008 222 NCBIfam ribosomal protein eS8 1 203 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pral4789g00008 222 PANTHER 40S RIBOSOMAL PROTEIN S8 1 219 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pral4789g00008 222 FunFam 40S ribosomal protein S8 109 180 - -
Pral4789g00008 222 CDD Ribosomal_S8e_like 5 201 - -
Pral4789g00008 222 FunFam 40S ribosomal protein S8 166 219 - -
Pral4789g00008 222 FunFam 40S ribosomal protein S8 32 165 - -
Pral4789g00008 222 Pfam Ribosomal protein S8e 5 201 IPR022309 -
Pral4789g00008 222 MobiDBLite consensus disorder prediction 11 26 - -
Pral4789g00008 222 Gene3D - 26 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4789g00008 Pral-Chr4789 64915 67216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4789g00008 1 210 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 81.905 3.09e-124 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4789g00008 K02995 - pcin:129288318 372.089