LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4789g00007	ATGGGTATTTCCAGGGATTCCATGCACAAGAGGCGTGCCACCGGTGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTTGGTCGACAGCCTGCAAACACTAAGCTGTCAAGTAACAAGACAGTCAGGAGAGTTCGTGTTAGAGGTGGCAATGTGAAATGGAGGGCTTTGCGATTGGATACAGGAAATTATTCGTGGGGTAGTGAAGCCGTGACTCGCAAAACACGTATCTTAGATGTGGTTTACAATGCCTCCAACAATGAGCTTGTGCGAACTCAAACCCTTGTGAAGAGTGCCATTGTTCAGGTTGATGCTGCTCCTTTCAAGCAGTGGTACCTTCAGCATTATGGTGTTGATCTTAGTAAGAAGAAGAAAGCAGCTGCCAAGAAGGATTCTACAGAGGAGGGTGAAGCTGCTGCAGCTGAAGAGACAAAGAAAAGTAATCATGTGCTTAGAAAACTAGAGAAGCGGCAGAAAGATCGAAAGCTGGATCCCCACATTGAAGAGCAATTTGGTGGTGGTCGATTGTTGGCCTGCATTTCTTCTCGACCTGGTCAATGTGGCAGAGCTGATGGCTACATATTGGAAGGCAAGGAATTGGAGTTTTACATGAAGAAACTCCAGAGGAAGAAGGGAAAGGGTGCTGCTTGA	657	0.4673	MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDLSKKKKAAAKKDSTEEGEAAAAEETKKSNHVLRKLEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA	218

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4789g00007	218	MobiDBLite	consensus disorder prediction	129	167	-	-
	Pral4789g00007	218	Gene3D	-	26	213	-	-
	Pral4789g00007	218	FunFam	40S ribosomal protein S8	32	161	-	-
	Pral4789g00007	218	MobiDBLite	consensus disorder prediction	11	26	-	-
	Pral4789g00007	218	CDD	Ribosomal_S8e_like	5	197	-	-
	Pral4789g00007	218	MobiDBLite	consensus disorder prediction	1	41	-	-
	Pral4789g00007	218	FunFam	40S ribosomal protein S8	109	176	-	-
	Pral4789g00007	218	ProSitePatterns	Ribosomal protein S8e signature.	11	30	IPR018283	GO:0003735\|GO:0005840\|GO:0006412
	Pral4789g00007	218	PANTHER	40S RIBOSOMAL PROTEIN S8	1	215	IPR001047	GO:0003735\|GO:0005840\|GO:0006412
	Pral4789g00007	218	FunFam	40S ribosomal protein S8	162	215	-	-
	Pral4789g00007	218	NCBIfam	ribosomal protein eS8	1	199	IPR001047	GO:0003735\|GO:0005840\|GO:0006412
	Pral4789g00007	218	Pfam	Ribosomal protein S8e	5	197	IPR022309	-
	Pral4789g00007	218	Gene3D	Ribosomal protein S8e, subdomain	108	176	IPR042563	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4789g00007	Pral-Chr4789	61029	63506	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4789g00007	1	206	Cytoplasmic Ribosomal Protein Gene Family	AT5G59240	83.495	2.64e-126	353

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4789g00007	K02995		-	pcin:129288318	395.201