Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4789g00003 ATGGAAAGATATGAAATTTTGAGAGAGCTAGGAGATGGTTCTTGCGGTCATGTATATAAGGCCCGTGATTTGAGGACATACGAGATTGTTGCTGTCAAAAAGTTGAAAACAAAGTTCTATTTCTGGGAAGAATTTACAAATTTAAGAGAAGTCAAGGCTCTCCAAAAAATGAATCACCCAAATATCATAAAGTTGAAAGAGGTTATCAGGGAAAATAATGAACTGTTTTTCATATTCGAATACATGGATTATAATCTTTATCAATTAATAAAAGACAGACAAAAGCCCTTTTCAGAGGAAGAGATACGTTCCTTCATGAAGCAAGTGCTGCGAGGTCTTAGTCACATGCACAAGAAAGGATTCTTTCACCGGGACTTGAAACCGGAGAATTTGCTGGTGACAAATGACGTTCTTAAAATTGCTGATTTCGGACTGGCTAGAGAAGTATCATCTATGCCTCCTTATACTCAATATGTTTCCACACGGTGGTATCGAGCTCCAGAAGTTTTGTTACAGTCTCCATGTTATACTCCTGCTGTTGACATGTGGGCAGCTGGCGCTATATTAGCTGAACTTTTCAGCTTGAACCCCATATTCCCTGGTGAAAGTGAAATAGATCAACTGTACAAGATATATTGTGTTCTTGGTACCCCGGATTTGACTTCATTCCCTGTGGGAGCAAACAACTTGAGGCTATTAGACATCGTTGGTCATGAAGTGGTTCCACCTTCAAAGCTTTCTGATATAATTCCTAATGCTAGCTTGGAAGCTATAGATTTGATCACGCAACTGTTATCATGGGACCCATCAAGAAGGCCTGATGCAGATCATGCACTGCAACATCCTTTTTTCCATGTGAGTACATGGGTTCCTTGTCCAATTCGCGATCCACTTGAACTAAAGCTGAGTAGCAAGAGGGCAAAACCAAATCTTGAGCTCAAGTTGCAGGATTTTGGTCCCGACCCCGATGACTGTTTTCTTGGCTTAACGCTAGCTGTAAAGCCCAGCATTTCAAACTTGGATGGGACCCACAATGTATCGCAAGGCATGGGAGAGAATGTGCTGTTCTGTTCCGACTTCAGTGATCATTCAGACCAATCAGCGAGGTATGGTTATTGTTTGCTCTAG 1128 0.4131 MERYEILRELGDGSCGHVYKARDLRTYEIVAVKKLKTKFYFWEEFTNLREVKALQKMNHPNIIKLKEVIRENNELFFIFEYMDYNLYQLIKDRQKPFSEEEIRSFMKQVLRGLSHMHKKGFFHRDLKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAAGAILAELFSLNPIFPGESEIDQLYKIYCVLGTPDLTSFPVGANNLRLLDIVGHEVVPPSKLSDIIPNASLEAIDLITQLLSWDPSRRPDADHALQHPFFHVSTWVPCPIRDPLELKLSSKRAKPNLELKLQDFGPDPDDCFLGLTLAVKPSISNLDGTHNVSQGMGENVLFCSDFSDHSDQSARYGYCLL 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4789g00003 375 FunFam Probable serine/threonine-protein kinase DDB_G0268078 83 291 - -
Pral4789g00003 375 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Pral4789g00003 375 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4789g00003 375 CDD STKc_MAK_like 4 284 - -
Pral4789g00003 375 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Pral4789g00003 375 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4789g00003 375 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 299 - -
Pral4789g00003 375 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4789g00003 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Pral4789g00003 375 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Pral4789g00003 375 FunFam Serine/threonine-protein kinase MHK 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4789g00003 Pral-Chr4789 30194 38298 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4789g00003 1 284 Core Cell Cycle Gene Families AT3G48750 38.667 1.01e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Pral4789g00003 Pkinase 9e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4789g00003 K08829 K08830 gmx:100792842 657.907