Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4789g00001 ATGGATCTTCTCCTTCTTTTTCCTGCTCACGGTAGTTCTGAATCTAAAGGAGGAGGACTAGCGTGGGCTCTCTTGTTTTTACTATTGGTAGCTTTCATTGTTAGATCAACGAGTCATCAGAAGAAGAAGAAGAAGCAGCAGCAGAAGCAGAAAGCCCCAGAAGCCAAAGGAGGGCTGCCTCTAATAGGTCACCTCCATCTTCTGGGCGGTGGTGTGCCAGTTTTTAGGACTCTCTCTTCCATGGCCGAAGCTCATGGCCCCATCTTCTCCCTCAGGCTCGGCTTTCACAACACTCTCATCGTCTCCGGCAGAGAACTCGCCAAAGAATGCCTCTCCACCTTCGACAAAATCTTCGCCACCAGGCCCAACATCGCCGCAGGGAGGTACATGGGGTATAACAATGCGATATTTGCGCTGGCACCGTATGGGGAGTACTGGAGAGAGATGAGGAAGATAGCCACTTTGGAGCTGCTCTCATCGCACAGGCTCCAGAAACTGAAGCACGTGAGAGACTCCGAGATACTATGTCTTGTGAAGGATTTGTTTTCAACCTATGAACGACACAATAAGAACATTACTCATCATGATCATATGGTTGAGGTGCCTATGAGTCAGCTCTTAGAGCACTTGACCTTCAATATCAACGTCCGCATTATTGCCGGCAAGAGATTCTCAGGGGATGAGAAAACCCTAACTGATGAAGAAGGGGAGGCGTTCAGGTTGAAGAGGGCGGTGAAGGAGGCGACATATCTGAGCGGAGTGTTCGTGGAGGCGGACGCGCTGCCGTTAAAGTGGCACAAGTGGGTGGACTTGCAGGGACATGTGAGGGCCATGAAGAAAACGGCCAAGGACGTAGACTCAGTGCTGTCTCTGTGGCTTCACCAGCACCTTCACAAGACCACAACAGCTCATTCTGATGGAGACCATTCTGATTTCATGGACGTCCTCATTTCCATGTTCTCCGATCAGGATGCTCTCATTTGTGGCCATCAACGCGACGTCGTTATCAAGGCCACTGCTTTGAATCTGATCCTTACGGGCACCGGAAGCACAGCAATAACCCTGACATGGGCATTATCTTTGCTCTTAAACCATCCAAATGTCCTTAAAAAAGCACAAGACGAGCTCGACACCAACATAGGAACACACAAATGGGTCCAAGAATCTGACATTAAGAACCTTCAATACCTCCAAGCCATCATCAAAGAGACCCTTCGTCTCTATCCTCCAGCTCCATTAACTGGAATCAGAGAAGCCATGGAAGACTGCTTCGTCGGAGGCTACTTCGTCCCAAAAGGCACTCGTCTTCTCATCAACATCTGGAAGCTTCAAAGGGACCCACAAGCATGGAAAAACCCTAACGAGTTCTTGCCTGAGAGATTCATGGAGGAGGATCATAAGGATTTGGATTTTAAGGGTCAGAACTTCGAGTACATTCCGTTTAGTTCAGGAAGAAGGTCGTGCCCAGGAACCACCTTTGGGCTTCAAGTCGTGAGCTTGACGCTGGCTCGGTTGCTTCAAGGATTTGATCTGTCGGCGCCGGCGCCGGCAGCCAAGGTTGGCGGTGTTGCAGTGGAAATGAGCGAAGGCTTAGGGGTGGCTTTGCCTAAGCTTCATCCACTTCAAGTTATGATCAAGCCTCGTCTTTCGTTTGAGCTTTATCAGCAACTTTGA 1674 0.4958 MDLLLLFPAHGSSESKGGGLAWALLFLLLVAFIVRSTSHQKKKKKQQQKQKAPEAKGGLPLIGHLHLLGGGVPVFRTLSSMAEAHGPIFSLRLGFHNTLIVSGRELAKECLSTFDKIFATRPNIAAGRYMGYNNAIFALAPYGEYWREMRKIATLELLSSHRLQKLKHVRDSEILCLVKDLFSTYERHNKNITHHDHMVEVPMSQLLEHLTFNINVRIIAGKRFSGDEKTLTDEEGEAFRLKRAVKEATYLSGVFVEADALPLKWHKWVDLQGHVRAMKKTAKDVDSVLSLWLHQHLHKTTTAHSDGDHSDFMDVLISMFSDQDALICGHQRDVVIKATALNLILTGTGSTAITLTWALSLLLNHPNVLKKAQDELDTNIGTHKWVQESDIKNLQYLQAIIKETLRLYPPAPLTGIREAMEDCFVGGYFVPKGTRLLINIWKLQRDPQAWKNPNEFLPERFMEEDHKDLDFKGQNFEYIPFSSGRRSCPGTTFGLQVVSLTLARLLQGFDLSAPAPAAKVGGVAVEMSEGLGVALPKLHPLQVMIKPRLSFELYQQL 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4789g00001 557 CDD CYP82 86 548 - -
Pral4789g00001 557 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS E-class P450 group I signature 439 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Pral4789g00001 557 SUPERFAMILY Cytochrome P450 58 548 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 Pfam Cytochrome P450 57 513 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 FunFam Cytochrome P450 82C4 42 546 - -
Pral4789g00001 557 Gene3D Cytochrome P450 44 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4789g00001 557 PANTHER CYTOCHROME P450 82C3-RELATED 27 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4789g00001 Pral-Chr4789 5529 9535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4789g00001 52 554 Cytochrome P450 AT4G31940 47.723 6.63e-165 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4789g00001 K17961 - gmx:100787489 613.224