Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4786g00003 | ATGGGGTTGACCTCAGGCTCCAATATCAACCAGCAATCGTCTTCTAAAATGCTACCTCCACGCCAGCAATCTCGTGTTGGAGGACTGCAAACTTCACTATCCCTAGTTTCTTCAGATCCTCGTCTCTCTCCTGAGGAACCTAGATCAAACTCTGACAATATTCGAGAATCTCCTACTGAAAGTGCTAGTTCACGAGAAACCTGGCCCACTGCTGAAGCTATTGCTGCAAAAAAAATGGCAAATGGGAAGGCTGAGAATGATTGCCCTGAGCTGTCAGTCATCCGTCGTGTTTCTAGTGCCAACAAAATCACCCTTCAGGACATAGGAAGAGAAAGGGTTGACATAATATCTGAAAAGATGCATCGTCTACCTGATGAATTTTTAGAAGAACTGAAGAACAGCCTACGAGTGATCCTTGAGGGAGGGAATGGTTCACAGCACAGGGAGGAATTCTTCACTTTGCAGAGGCTTGTTCAAAGTCGAACTGATTTGACGGCCAAGACATTGATCAGAGCACATCGTGTGCAGCTTGAAATCCTCGTGGCTATTAATACTGGAATTCAGGCATTTTTGCATCCCAACATCGGTCTTTCACAACCTTCCCTCATTGAGATCTTTGTGTACAGGAGATGCAGAAATATCGCTTGTCAGAACCAGCTTCCTGCTGATGACTGTACCTGTGAAATATGCACCAGCAGGAATGGTTTCTGCAATCTCTGCATGTGTGTAATCTGCAACAAGTTTGACTTTGAAGTAAATACGTGCCGCTGGATTGGGTGTGATTTATGCTCTCACTGGACTCATACAGATTGTGCCATTCGTGATCAACTTATTTGCATGGGCCCTTCTGCAAAGAGTGGTGCAGGACCAAGCGAAATGGTTTTCAGGTGCCAAGCATGCAAGAGGACTTCAGAGCTGTTGGGTTGGGTTAAAGATGTTTTTCTGCATTGTGCGCCATCATGGGATGGGGAGGCTTTAATGAGGGAACTTGATTTTGTTAGTAGGATCTTTCATGGTAGTAAAGACCCCAGGGGGAGGAAAATGTGCCGGAATTGTGATGATCTAAAGGAGAAAATGAAAAGTGGAATGGTGGAACCAAATGCTGCATGCAGTGCAATGTTGATGCTTTTCCAAGAGCTTGAGGTGGACTCCCCAAAGAGCCTTGAAAATGGAGAAAGTGGAAGGATGATTGCTCCACAGGACGCATGCAATAGAATTGCTGAAGTCGTGCAGGAGGCTATAAGAAAAATGGAAATGGTAGCTGATGAGAAGATGAGAATGTTCAAGAAGGCTCGCTTGGCTCTTGATGCTTGTGATCGAGAATTGGCAGATAAGGCGAGGGAAGCGGCAGAACTCAAGATGGACAGGCAAAAAAAGAAATCACAGATAGAAGAACTGGAGAGAATTGTAAGGCTTAAAACTGCAGAGGCTGATATGTTTCAGCTTAAGGCTAACGAGGCTAAACGAGAGGCTGAGAGGCTTCAGAGAATTGCTCTTGCCAAATCGGATAAATCAGAGGAAGAATATACTAGCAACTACTTGAAACAACGATTGAGTGAGGCTGAAGCTGAGAAGCAATATCTCTATGAGAAGATCAAATTGCAGGAGAGTTCTCGTGCTTCGCAGGGTAGTAGTGGCGACCCATCTCAGTTGCTGATGTATTCCAAAATCCATGATCTGCTCTATAGTGTGCCTCCCAAGGCAGATAGTCAGCCTAATGAGCGTCACCCATTCCGAACAAATCCATGA | 1749 | 0.4511 | MGLTSGSNINQQSSSKMLPPRQQSRVGGLQTSLSLVSSDPRLSPEEPRSNSDNIRESPTESASSRETWPTAEAIAAKKMANGKAENDCPELSVIRRVSSANKITLQDIGRERVDIISEKMHRLPDEFLEELKNSLRVILEGGNGSQHREEFFTLQRLVQSRTDLTAKTLIRAHRVQLEILVAINTGIQAFLHPNIGLSQPSLIEIFVYRRCRNIACQNQLPADDCTCEICTSRNGFCNLCMCVICNKFDFEVNTCRWIGCDLCSHWTHTDCAIRDQLICMGPSAKSGAGPSEMVFRCQACKRTSELLGWVKDVFLHCAPSWDGEALMRELDFVSRIFHGSKDPRGRKMCRNCDDLKEKMKSGMVEPNAACSAMLMLFQELEVDSPKSLENGESGRMIAPQDACNRIAEVVQEAIRKMEMVADEKMRMFKKARLALDACDRELADKAREAAELKMDRQKKKSQIEELERIVRLKTAEADMFQLKANEAKREAERLQRIALAKSDKSEEEYTSNYLKQRLSEAEAEKQYLYEKIKLQESSRASQGSSGDPSQLLMYSKIHDLLYSVPPKADSQPNERHPFRTNP | 582 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4786g00003 | 582 | Coils | Coil | 435 | 504 | - | - | |
Pral4786g00003 | 582 | MobiDBLite | consensus disorder prediction | 1 | 68 | - | - | |
Pral4786g00003 | 582 | Pfam | PHD - plant homeodomain finger protein | 211 | 334 | IPR032881 | - | |
Pral4786g00003 | 582 | PANTHER | VERNALIZATION-INSENSITIVE PROTEIN 3 | 27 | 563 | IPR004082 | - | |
Pral4786g00003 | 582 | SMART | PHD_3 | 241 | 301 | IPR001965 | - | |
Pral4786g00003 | 582 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Pral4786g00003 | 582 | MobiDBLite | consensus disorder prediction | 563 | 582 | - | - | |
Pral4786g00003 | 582 | PIRSF | UCP025218 | 5 | 568 | - | - | |
Pral4786g00003 | 582 | MobiDBLite | consensus disorder prediction | 54 | 68 | - | - | |
Pral4786g00003 | 582 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 119 | 141 | IPR004082 | - | |
Pral4786g00003 | 582 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 464 | 484 | IPR004082 | - | |
Pral4786g00003 | 582 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 503 | 525 | IPR004082 | - | |
Pral4786g00003 | 582 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 321 | 340 | IPR004082 | - | |
Pral4786g00003 | 582 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 161 | 176 | IPR004082 | - | |
Pral4786g00003 | 582 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 202 | 223 | IPR004082 | - | |
Pral4786g00003 | 582 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 176 | 191 | IPR004082 | - | |
Pral4786g00003 | 582 | PRINTS | Arabidopsis thaliana 130.7kDa hypothetical protein signature | 248 | 268 | IPR004082 | - | |
Pral4786g00003 | 582 | Pfam | Coiled-coil region of Oberon | 429 | 561 | IPR032535 | - | |
Pral4786g00003 | 582 | CDD | PHD_OBE1_like | 241 | 300 | IPR047578 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4786g00003 | Pral-Chr4786 | 10966 | 13441 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4786g00003 | 211 | 313 | PHD Gene Family | AT5G57380 | 31.731 | 7.83e-09 | 56.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4786g00003 | - | - | gmx:100795450 | 1008.82 |