Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4785g00013 ATGAGCACCCAAACAGTCAGGGGACCTGCTGTCAGAAGTGGTCGTAGGAGGAAGACAGTTTTGAACTTGGACCTGAACTGTTTCCCGCCAAGTGAGAATCAGGAACAGGGGGGGCCTTCAACTCAATTGGTGCCTCGAGAGGTTCAAGCAGGCCAACAACTGCCAGTTGCACAACCTGTGATGATTGATGTGGAGGCTATTGAAGATGATGATGTTGTTGAATCCAGTCCCAGAGCTTTTGCTGAGGCTAAAAACAATTTTAGAAGAAATCGTAGGAGGACTATAGTTGATGTGGATTTAGAGGAGCGGACAGGAGGGATCAATAATGATCGCAACAAACGCAAAAGAAGTTCATCAAACCGAACAATTATTAACTGCGATCTTTATGTAAACCTGGAAGCAAGTAACAGTTCAATGACGGAAAACATAAGAATGCCACCAGAACCTCCAAAGGATCCTGTCTTTAACTGCCCAATATGTATGGGCCCACTAGTAGAAGAAATGTCAACAAGATGTGGTCATATTTTTTGCAATAATTGCATTAGGGCTGCCATAAAAGTGCAAAGTAAATGCCCCACCTGCAGGAAAAAGGTTACTGTGAAGGAGCTTAGAAGGGTCTTCCTGCCAGCAACTGGTTGA 639 0.4444 MSTQTVRGPAVRSGRRRKTVLNLDLNCFPPSENQEQGGPSTQLVPREVQAGQQLPVAQPVMIDVEAIEDDDVVESSPRAFAEAKNNFRRNRRRTIVDVDLEERTGGINNDRNKRKRSSSNRTIINCDLYVNLEASNSSMTENIRMPPEPPKDPVFNCPICMGPLVEEMSTRCGHIFCNNCIRAAIKVQSKCPTCRKKVTVKELRRVFLPATG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4785g00013 212 Pfam Zinc finger, C3HC4 type (RING finger) 156 194 - -
Pral4785g00013 212 PANTHER ELFLESS, ISOFORM B 2 211 - -
Pral4785g00013 212 SMART ring_2 157 194 IPR001841 -
Pral4785g00013 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 129 210 IPR013083 -
Pral4785g00013 212 ProSitePatterns Zinc finger RING-type signature. 172 181 IPR017907 -
Pral4785g00013 212 ProSiteProfiles Zinc finger RING-type profile. 157 195 IPR001841 -
Pral4785g00013 212 SUPERFAMILY RING/U-box 156 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4785g00013 Pral-Chr4785 46489 52484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4785g00013 1 211 C3H Transcription Factor Family AT5G48655 49.765 2.03e-47 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4785g00013 K22651 - qsa:O6P43_026661 270.781