Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4784g00029 ATGGCAAAAGAGCAAAACCACGACGCTGCCATCATCAACCCTCTTCGACGCCAGAGCAAAGACGAAGATAGGGAATTGGAATTTGGATCCGACGAGCCTGAGGCTCCATTGCCTCTCACTGCTACTTCCCGGGTCTTGTATATGTTGGGAGATATCGCGGCAGGGCCTGCGTTTAGGTTTACGCAATGGCTCGAATCGGTTCGTAAACGCACTGCCAGAAATCGCCCCTCTGGCTTCCCCCACCGCCTTACGAGGCTTCCCGATGCTATGCCTAGTTCAGAAGGATCAATGGACGATCCAAAAAGTATTTCACCTCCTGTGCAAACAACAGAACTTAGTTTGTGGGAAAGACTTGGTAATGCTGCTATCTTGGACATCGAATCTAGTTCTTTTTCTTGGGAGAGGCTCTCTTCACTGCATCACACTGAACACAACAGCAGCACTGAACATTCTGAGGATGAAATGAACAAAGCTCTTGAGGTAACTGTAAATTCTGGTGGAGTTGTCTTCTTTGCCTTCTTTAATCGCCTTGGGAGTGATGATACTTCTTCAAAGGAGGAAGCTGCTGTAATAAAAATATCATCGTCTAGAATGGCGACACAATCTGAACGCCTTGGATATGAATTTGCCAAGTGGTTGGGAGTCCAAACTCCTCAGGCTAGAGTTATTCACAATACCAGTCCAGAGTGGCTTCAAATAAAGGAAGCTGCAGAAAAAGCTAGAAATAGAGCATTTTCTGAAGGAGATGAAATTGGTGAAATGACTTGTTTAGAACTTTTGGAAGCACTCGAGCTTAGTAGGTGCCTCTTTTTTATGAGTTATATACATGGGTCACCTTTGTTAGAAAGCTCAACTGCATTTGAGTCTCAGGAATCTGCTGAAAGAACGGCAGCAGCTCTTGGCAGGGTATTGATGCTAGACCTAGTCATCAGAAATGAAGATAGGCTCCCATGCCGTCAGCTTAGATGGCGTGGGAATTCTGCAAATTTGCTGTTGGCTGAAAAGATGATGTCTGCAACCGCTAACTCTCTTGAAAAGGCCTTTGATTCTGCCATGAATCAATATAGACCAAGGGTGATAAGGGCACTTCAAAAAGAAAGAAGATCAACTTCTGTAGGTATCAGATTGAGTCCTAATAATCCTGGATTGCTTTCACAGGCCTCTGATACCTCAGATATCTCAGAATCACCAAGTTGTAGTGACATTAGCCTTGAAAGTCCAACTTCCGGTGAATCACAATGTACTGACATTGTGGCTATTGATTCTGGTGTTCCTCGGCGACCCCCTGCTGGAAAACGTGCAGATGATCAGGCTAATTATCCTAAGTTGGTTGAGTTACTTATCAATAGTTCTGGGTTTTGCTCGAACCTGTTACATGATATCACTGGAGGAAAATTAGGATCTCCTTCACTAGAAGAAATTAATAAAACTACTGATGTATATGCAAGTGAGACAGCATCAGTAGTTCATGAGTTCCGTAGCGGTTTCCGTGCTGCTCTTAGAGATCTTCAGGGATTTCATATATTCCTACTTACTCTACACCAAAAGCTTGATAGCTTATTAAGGTCATTTATGAACATTATAAGCAAAACATCACCAGGGGAGTCTGACAAAGAGGATTCAATGGTTCCTGATTCACCTTCACTAAATACTGGAGACGGTAGCTGTCCATCTCCAGCAACCAAGGACAGATCTGTTATCGAAAACCATCCAGATTATAGTGATTCAGAATCACAGAGAACCGCTCCAAGGGTATCATGGTCAGGGAATAAAGAAAACTCTGATACTGCTTCTCCTATGTCAAGGGAAGGTTGGCATGGAAAGTTCTACAAAGGAAGTGGGGATCCACTTCGTAGTAGTCTTCGCTTAACAGCAAAGCTACGCGACTTCCATAAATATGCAAAGGTTGATGCAGAGTCTAATAAAGAATTAGAACAGTGGAACGAAACACTTAAAAGTGATGCCATCAAGCTATGCCAGGACAACAATTTCAACACTGGATTTTTTGAGTGCAGCGATAATAACAGTGTTGTTGATGCATATGAACTGAAGGTCAGACTTGAGCACATTCTTGAAAGGATTGCATTAATCTCTGAGGCTGCAAATACAGAGAAGCCATCTGCTGTTACAAATAGTCTATTCATTGGTGGGGCACTGGCTGCAAGATCTGTATACACACTGCAACACTTGGGAATCACTCATATTCTGTGTTTGTGCACCAATGAAATTGGGCAGTCTGATTCTCAGTTTCCTGATCTATTTAAGTACAAAAATTTCTATGTTTGTGACGATATAGATTCTAACATCAGCAGCATATTTGAAGAAGCCTGTGACTTTATTGATCATGTTGAACAGAAAGGCCAGAGAATTTTAGTTCATTGCTTCGAAGGGAAAAGCAGAAGCGTCACGTTGGTCCTTGCTTACTTAATGCTCAGGAAGAAGTTCACTTTACTAGAAGCATGGAATATTCTGAAACGAGTTCATCGTCGAGCACAACCCAATGATGGCTTCGCAAAGATCTTACAGGAATTGGATAAGAAACTGCATGGAAGGGTCTCCATGGAGTGGCAGCAAAGGAAACCGATGATGAAGGTTTGTCCAATTTGTGGAAAAAATGCAGGACTAAGTAGCAGCTCGCTTAAGTTGCATCTGCAGAAATCCCATAAAAAACTATCATCAGGGAGCGTGGATAGTGCTATGACGATGGAGATCCAGAAGGCTTTAACAGCTTTGAAAATTAGTCGTGGCGGGAGTGTCAGCCCCACGCAAAGGCAGCCTAGTTCAATAGTGGATGAGTGA 2799 0.4298 MAKEQNHDAAIINPLRRQSKDEDRELEFGSDEPEAPLPLTATSRVLYMLGDIAAGPAFRFTQWLESVRKRTARNRPSGFPHRLTRLPDAMPSSEGSMDDPKSISPPVQTTELSLWERLGNAAILDIESSSFSWERLSSLHHTEHNSSTEHSEDEMNKALEVTVNSGGVVFFAFFNRLGSDDTSSKEEAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTSPEWLQIKEAAEKARNRAFSEGDEIGEMTCLELLEALELSRCLFFMSYIHGSPLLESSTAFESQESAERTAAALGRVLMLDLVIRNEDRLPCRQLRWRGNSANLLLAEKMMSATANSLEKAFDSAMNQYRPRVIRALQKERRSTSVGIRLSPNNPGLLSQASDTSDISESPSCSDISLESPTSGESQCTDIVAIDSGVPRRPPAGKRADDQANYPKLVELLINSSGFCSNLLHDITGGKLGSPSLEEINKTTDVYASETASVVHEFRSGFRAALRDLQGFHIFLLTLHQKLDSLLRSFMNIISKTSPGESDKEDSMVPDSPSLNTGDGSCPSPATKDRSVIENHPDYSDSESQRTAPRVSWSGNKENSDTASPMSREGWHGKFYKGSGDPLRSSLRLTAKLRDFHKYAKVDAESNKELEQWNETLKSDAIKLCQDNNFNTGFFECSDNNSVVDAYELKVRLEHILERIALISEAANTEKPSAVTNSLFIGGALAARSVYTLQHLGITHILCLCTNEIGQSDSQFPDLFKYKNFYVCDDIDSNISSIFEEACDFIDHVEQKGQRILVHCFEGKSRSVTLVLAYLMLRKKFTLLEAWNILKRVHRRAQPNDGFAKILQELDKKLHGRVSMEWQQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALTALKISRGGSVSPTQRQPSSIVDE 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4784g00029 932 SMART dsp_5 705 847 IPR020422 GO:0006470|GO:0008138
Pral4784g00029 932 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 17 930 IPR035010 GO:0004721|GO:0009737|GO:0043622
Pral4784g00029 932 MobiDBLite consensus disorder prediction 530 609 - -
Pral4784g00029 932 ProSiteProfiles Dual specificity protein phosphatase domain profile. 705 850 IPR020422 GO:0006470|GO:0008138
Pral4784g00029 932 SUPERFAMILY Protein kinase-like (PK-like) 62 437 IPR011009 -
Pral4784g00029 932 Gene3D Protein tyrosine phosphatase superfamily 688 860 IPR029021 -
Pral4784g00029 932 MobiDBLite consensus disorder prediction 73 106 - -
Pral4784g00029 932 CDD DSP 706 843 - -
Pral4784g00029 932 Gene3D - 278 533 IPR036940 -
Pral4784g00029 932 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 763 826 IPR000387 GO:0016311|GO:0016791
Pral4784g00029 932 MobiDBLite consensus disorder prediction 370 411 - -
Pral4784g00029 932 Pfam Dual specificity phosphatase, catalytic domain 718 845 IPR000340 GO:0008138|GO:0016311
Pral4784g00029 932 FunFam Dual specificity protein phosphatase PHS1 677 851 - -
Pral4784g00029 932 MobiDBLite consensus disorder prediction 578 600 - -
Pral4784g00029 932 MobiDBLite consensus disorder prediction 1 35 - -
Pral4784g00029 932 MobiDBLite consensus disorder prediction 543 558 - -
Pral4784g00029 932 Pfam Actin-fragmin kinase, catalytic 111 368 IPR015275 -
Pral4784g00029 932 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 705 849 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4784g00029 Pral-Chr4784 237538 245313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4784g00029 18 916 Protein tyrosine phosphatase (PTP) family AT5G23720 67.181 0.0 1176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4784g00029 K14165 - cave:132174733 1356.66