Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4784g00028 ATGAACTGGGCGACATGGTGGAAATGGAGGGCCTTGGCCTTGGCCATGGCTATAGCGGTGTCTTTTCAGATGGGTGTTTGCCTGGACGCTCATTCTCTTTCTTCGCTTGGGGATGTAATTCTCAGGCTTCCTGGCCAGCCCCAAGTTCGCTTTCAGCAGTTCTCAGGATACGTTGAAGTTGACGATAAGAATGAGAAGGCTCTGTTCTACTATTTTGTTGAATCGGACACTGATCCTGCTTCGAAGCCTTTGGTTCTCTGGCTCAATGGAGGGCCTGGTTGTTCTTCCTTGGGAGTAGGTGCGTTCTCTGAAAATGGGCCTTTCAGACCAAATGGGAAAGTTCTAATTGAAAACAAGTATAGTTGGAACAAAGAAGCAAACGTGCTGTATTTGGAGACACCCGTTGGGGTGGGGTTTTCTTATGCGAAAGGAAGTTCCTCCCATTTGACAGTAAACGACGAGGCAACAGCCAGGGATAACCTTATGTTCCTGATACGCTGGTTCTCCAAATTCCCCCAGTATAGGCACAGAGACTTGTTTCTGACTGGGGAAAGCTATGCAGGGCATTATGCTCCTCAACTTGCAAAGCTCATGATTGAGATGAACAAAAAGGAGAAGATATTCAATCTTAAAGGCATAGCTTTGGGTAATCCACTTCTAGAATATGCCACGGACTTCAATTCAAGGGCTGGGTTCTTCTGGTCTCATGGATTGATATCAGATTCAACGTACAAAATGTTCACTAAAGTGTGTAATTATTCTCGGTACGTTAGTGAATACTATAGAGACTCAGTTTCGCCTCTTTGTTCAAAGGTTATGCACCAAGTAGCCAGAGAAACCAGTAAATTTGTGGACAAGTACGATGTTACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAGTCCAAAGTTATTTGTCCTCAAACTGAACAAGCAAACGAGATGGTAGATGTATGCGTAGATGACAAAGTTACAAATTATTTAAACCAAAAAGATGTACGTGGGGCTCTCCATGCCAGGCTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAATATTCTGGACTACGATATGCTCAACCTGGAAGTTCCTACACTTCCTCTTGTTGGATCACTAATAAAAGCCCGAGTTCAGGTCTTAATTTACAGTGGAGATCAAGATTCTGTTCTTCCTCTGACTGGTAGCCGCACCTTGGTTCAAAAGCTGGCCAGGAAATTAGAACTGAACACAACAGTTCCTTACAGAGTATGGTTTGCGGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGTAATATCCTCTCATTTGCCACCGTGAGAGGAGCATCCCATGAAGTTCCTTTCTCACAACCTGAGAGATCCCTTGTGCTCTTCAAGTCATTTTTGCAAGGCAGGCCTCTACCTGACAGAATCTTGACACAAAGTTAG 1428 0.4475 MNWATWWKWRALALAMAIAVSFQMGVCLDAHSLSSLGDVILRLPGQPQVRFQQFSGYVEVDDKNEKALFYYFVESDTDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGKVLIENKYSWNKEANVLYLETPVGVGFSYAKGSSSHLTVNDEATARDNLMFLIRWFSKFPQYRHRDLFLTGESYAGHYAPQLAKLMIEMNKKEKIFNLKGIALGNPLLEYATDFNSRAGFFWSHGLISDSTYKMFTKVCNYSRYVSEYYRDSVSPLCSKVMHQVARETSKFVDKYDVTLDVCISSVLSQSKVICPQTEQANEMVDVCVDDKVTNYLNQKDVRGALHARLVGVRKWDVCSNILDYDMLNLEVPTLPLVGSLIKARVQVLIYSGDQDSVLPLTGSRTLVQKLARKLELNTTVPYRVWFAGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLQGRPLPDRILTQS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4784g00028 475 Gene3D alpha/beta hydrolase 40 470 IPR029058 -
Pral4784g00028 475 FunFam Carboxypeptidase 365 464 - -
Pral4784g00028 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Pral4784g00028 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Pral4784g00028 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Pral4784g00028 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
Pral4784g00028 475 SUPERFAMILY alpha/beta-Hydrolases 42 468 IPR029058 -
Pral4784g00028 475 ProSitePatterns Serine carboxypeptidases, histidine active site. 434 451 IPR033124 GO:0004185
Pral4784g00028 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 451 IPR001563 GO:0004185|GO:0006508
Pral4784g00028 475 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Pral4784g00028 475 Pfam Serine carboxypeptidase 44 464 IPR001563 GO:0004185|GO:0006508
Pral4784g00028 475 FunFam Carboxypeptidase 33 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4784g00028 Pral-Chr4784 231377 234713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4784g00028 327 467 Calmodulin-binding Proteins AT2G22960 27.660 4.27e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4784g00028 K16297 - gmx:100795668 795.423