Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4784g00026 ATGAACTGGGCGACATGGTGGAAATGGAGGGCCTTGGCCTTGGCCATGGCTATAGCGGTGTCTTTTCAGATGGGTGTTTGCCTGGACGCTCATTCTCTTTCTTCGCTTGGGGATGTAATTCTCAGGCTTCCTGGCCAGCCCCAAGTTCGCTTTCAGCAGTTCTCAGGATACGTTGAAGTTGACGATAAGAATGAGAAGGCTCTGTTCTACTATTTTGTTGAATCGGACACTGATCCTGCTTCGAAGCCTTTGGTTCTCTGGCTCAATGGAGGGCCTGGTTGTTCTTCCTTGGGAGTAGGTGCGTTCTCTGAAAATGGGCCTTTCAGACCAAATGGGAAAGTTCTAATTGAAAACAAGTATAGTTGGAACAAAGAAGCAAACGTGCTGTATTTGGAGACACCCGTTGGGGTGGGGTTTTCTTATGCGAAAGGAAGTTCCTCCCATTTGACAGTAAACGACGAGGCAACAGCCAGGGATAACCTTATGTTCCTGATACGCTGGTTCTCCAAATTCCCCCAGTATAGGCACAGAGACTTGTTTCTGACTGGGGAAAGCTATGCAGGGCATTATGCTCCTCAACTTGCAAAGCTCATGATTGAGATGAACAAAAAGGAGAAGATATTCAATCTTAAAGGCATAGCTTTGGGTAATCCACTTCTAGAATATGCCACGGACTTCAATTCAAGGGCTGGGTTCTTCTGGTCTCATGGATTGATATCAGATTCAACGTACAAAATGTTCACTAAAGTGTGTAATTATTCTCGGTACGTTAGTGAATACTATAGAGACTCAGTTTCGCCTCTTTGTTCAAAGGTTATGCACCAAGTAGCCAGAGAAACCAGTAAATTTGTGGACAAGTACGATGTTACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAGTCCAAAGTTATTTGTCCTCAAACTGAAGCAAACGAGATGGTAGATGTATGCGTAGATGACAAAGTTACAAATTATTTAAACCAAAAAGATGTACGTGGGGCTCTCCATGCCAGGCTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAATATTCTGGACTACGATATGCTCAACCTGGAAGTTCCTACACTTCCTCTTGTTGGATCACTAATAAAAGCCCGAGTTCAGGTCTTAATTTACAGTGGAGATCAAGATTCTGTTCTTCCTCTGACTGGTAGCCGCACCTTGGTTCAAAAGCTGGCCAGGAAATTAGAACTGAACACAACAGTTCCTTACAGAGTATGGTTTGCGGGCCAGCAGGTTGGTGGGTGGACTCAAGTTTATGGTAATATCCTCTCATTTGCCACCGTGAGAGGAGCATCCCATGAAGTTCCTTTCTCACAACCTGAGAGATCCCTTGTGCTCTTCAAGTCATTTTTGCAAGGCAGGCCTCTACCTGACAGAATCTTGACACAAAGTTAG 1425 0.4477 MNWATWWKWRALALAMAIAVSFQMGVCLDAHSLSSLGDVILRLPGQPQVRFQQFSGYVEVDDKNEKALFYYFVESDTDPASKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGKVLIENKYSWNKEANVLYLETPVGVGFSYAKGSSSHLTVNDEATARDNLMFLIRWFSKFPQYRHRDLFLTGESYAGHYAPQLAKLMIEMNKKEKIFNLKGIALGNPLLEYATDFNSRAGFFWSHGLISDSTYKMFTKVCNYSRYVSEYYRDSVSPLCSKVMHQVARETSKFVDKYDVTLDVCISSVLSQSKVICPQTEANEMVDVCVDDKVTNYLNQKDVRGALHARLVGVRKWDVCSNILDYDMLNLEVPTLPLVGSLIKARVQVLIYSGDQDSVLPLTGSRTLVQKLARKLELNTTVPYRVWFAGQQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLQGRPLPDRILTQS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4784g00026 474 ProSitePatterns Serine carboxypeptidases, histidine active site. 433 450 IPR033124 GO:0004185
Pral4784g00026 474 FunFam Carboxypeptidase 33 467 - -
Pral4784g00026 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Pral4784g00026 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Pral4784g00026 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Pral4784g00026 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Pral4784g00026 474 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Pral4784g00026 474 Gene3D alpha/beta hydrolase 40 469 IPR029058 -
Pral4784g00026 474 Pfam Serine carboxypeptidase 44 463 IPR001563 GO:0004185|GO:0006508
Pral4784g00026 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 450 IPR001563 GO:0004185|GO:0006508
Pral4784g00026 474 SUPERFAMILY alpha/beta-Hydrolases 42 467 IPR029058 -
Pral4784g00026 474 FunFam Carboxypeptidase 364 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4784g00026 Pral-Chr4784 231373 234713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4784g00026 326 466 Calmodulin-binding Proteins AT2G22960 27.660 4.30e-15 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4784g00026 K16297 - gmx:100795668 791.186