Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4784g00025 ATGACGGGAAAAAATGATTTTTCATTGATTTGGGTGCATCCTATTGTTCATGTTGATGTGTCAACATTCGAGGTGAAAAATGTTGATGTGGCAGTATTTGATGAAGCATCAAAACCAGAGTTCCCTGCAACTTCAGAAAGAAATGTAAGGTTTCGAGATCGTGAAGATTGCATATTACTCAGTCTCAAAAACGCTCATTCCTTCCACGGCAGCAGAAGAGAACGTGGTGGTGTGGTCATGGGAGCCGCCGGGGCCGGAAAGTCCAGGCTATCCATCGACCTCGCCACCCTTTTTCTTGCACAAACCATCAACTCCGACAAAATGCAAGTATACGAAGGCTTTGACATAGTCACCGATAAGATCACCAAGGAGGACCGACGAGTGGCTCCTCACCATTTGTTAGGAATTGAACAGAGAGCCCGGCCCCATCTCATTTCACAGTCTGCCCTTTCCGTAGACGCGTTAATGCCCGTGCTCGATCACTTCTTGGCCAAACGGGTCGATCAAATGTTGAAGAGTGGAATGGTAGATGAAGTGAGACCATTTTTCAGTCCAAAGGGAGACTATTCCCGAGGGATTAGAAAAGCTACCGGAGTTCCTGATGAGTTGGATCAGTATGATCCATTTTCAAATCGAATCATTTATTAG 648 0.4568 MTGKNDFSLIWVHPIVHVDVSTFEVKNVDVAVFDEASKPEFPATSERNVRFRDREDCILLSLKNAHSFHGSRRERGGVVMGAAGAGKSRLSIDLATLFLAQTINSDKMQVYEGFDIVTDKITKEDRRVAPHHLLGIEQRARPHLISQSALSVDALMPVLDHFLAKRVDQMLKSGMVDEVRPFFSPKGDYSRGIRKATGVPDELDQYDPFSNRIIY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4784g00025 215 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 156 206 - -
Pral4784g00025 215 Pfam IPP transferase 109 136 - -
Pral4784g00025 215 Gene3D - 78 139 IPR027417 -
Pral4784g00025 215 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 78 136 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4784g00025 Pral-Chr4784 214101 220560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4784g00025 150 199 C2H2 Transcription Factor Family AT2G27760 42.000 6.68e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4784g00025 K10760 - gmx:100803964 141.739