Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4784g00019 ATGGATGACGGCTGTCAGCATGAAAATGGCAGGCATAAGGTGGACTATTATAGAGGAGTACACTCCCCGTGGAATATGGCTCCTCAACATCAAGCAAAGGAACCAAATGCCTTAGTCATGAATAAGAAAATTATGTCCATCATAGCTGAAAGGGAGGCTGCTATTCGAGAACGAAATGCAGCTTTATCTGAAAAGAATGAAGCCTTGGCTGCTCGAGATGAGGCCCTTCGGCAGAGGGATGAAGCACTTGTTCAGAGGGATAGTGCCATAATGGAACGAGATAATGCCCTTGCTGCCCTTCAAATCCGGGACAACGCTGTCAACTTCCAATTGGGTAGTGGAATTCAACGCGGATCGAAGCGAATGCACCATTCCTCTAACCATCTTGTTGAAATGGCAGAAGCCGCATACAGCACAAAGGATACCACCATAACTGAGGCCTTCCCGGTGACAGTAATAAATTCTGAAGCTGTTAAATCTCATCAGGCAAAGAGAAAAAAGGAAGACAAGGCAATTTCTTCTAAGGCTTTGAAGAGCAAAGGAAAGAAAATGGGTGAGGATTTAAATAGGTCAGCTTCTTCTGAAGGAACTAAGATTAAATCTGAGTGGGATAGACAGGATGTTGGCTTGAATTTGGTTACATTTGATGAGACTACCATGCCAGCCCCAGTTTGCACATGCACTGGAGTACCACGGCAGTGCTACAAATGGGGAAATGGCGGGTGGCAGTCATCCTGTTGTACTACCTCCTTGTCAATGTATCCATTGCCACAGCTTCCAAACAAGCGCCATTCTCGAATTGGTGGAAGAAAAATGAGTGGAAGCGTCTTTACAAGACTGCTCAGTAGGGTAGCAGCAGAAGGCCAAGATTTATCTATACCATTGGATCTCAAGGACTACTGGGCCAGGCATGGAACAAATCGCTACATCACAATCAAGTAG 942 0.4544 MDDGCQHENGRHKVDYYRGVHSPWNMAPQHQAKEPNALVMNKKIMSIIAEREAAIRERNAALSEKNEALAARDEALRQRDEALVQRDSAIMERDNALAALQIRDNAVNFQLGSGIQRGSKRMHHSSNHLVEMAEAAYSTKDTTITEAFPVTVINSEAVKSHQAKRKKEDKAISSKALKSKGKKMGEDLNRSASSEGTKIKSEWDRQDVGLNLVTFDETTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTSLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSRVAAEGQDLSIPLDLKDYWARHGTNRYITIK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4784g00019 313 SMART GAGA_bind_2 1 313 IPR010409 -
Pral4784g00019 313 MobiDBLite consensus disorder prediction 161 189 - -
Pral4784g00019 313 MobiDBLite consensus disorder prediction 161 199 - -
Pral4784g00019 313 Pfam GAGA binding protein-like family 1 313 IPR010409 -
Pral4784g00019 313 Coils Coil 59 79 - -
Pral4784g00019 313 PANTHER - 1 313 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4784g00019 Pral-Chr4784 137291 140399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4784g00019 1 313 BBR or BPC Transcription factor family AT2G21240 60.635 5.54e-136 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pral4784g00019 GAGA_bind 4.5e-101 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4784g00019 - - jre:108986984 538.88