Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4784g00017 ATGGGTTGCGTGCTCGGAACGCGGGCGGATGGCGAAGGCCGACGGTCGGATTCCGGAACTCAGGATCACCGTCCTCGCGCTAGCCAGCGACATTCTGTCACTGACGGAGGTAATGCTGTTGTGGTTAGGAAGGAAGGGGCGGCGAGGGAGATGGAGGAGCAAGGGACTCGGCGTACCGGCGATTTCTCTGGGACTGTTCCGGCTCTGGAGAGACGGAAACTTAGACTTGATCCCTACGCTAAAACCGAACATGGTTGGCCGTTGTGGTTGATGGATGTGGCTGGCGAAGCTATACGAGATTGGTCTCCTCGTCGCGCCAACTCGTTCGAGAAGCTTGCTAAGATTGGGCAAGGGACTTATAGTAATGTATACAAGGCTAGGGACCTTCTTACTGGAAAGATAGTGGCACTAAAGAAAGTTAGGTTTGATAATATGGAGCCAGAGAGCGTGAAGTTCATGGCAAGAGAAATTATTCTGTTGAGGCGGCTTGATCACCCCAATGTCTTAAAACTTGAAGGTTTAGTTACTTCAAGAATGTCATGCAGTCTATACTTAGTATTCCAGTATATGGAACACGATCTCGCAGGGCTTGCAGCTCGCCAAGGTGTTAAGTTTAACGAGCCTCAGGTGAAATGCTATGTGAAGCAATTACTCTCTGGCCTTGAGCATTGCCATAGTCGAGGTGTTTTGCACCGAGATATCAAGGGTTCCAATCTGCTCATTGATAATGAAGGAATCCTTAAAATTGCCGATTTTGGCCTCGCCGCTTTCTATGATCCTGAGAAAAAGCAGCCTATGACAAGTAGAGTTGTCACCCTTTGGTACCGGCCTCCTGAGCTTCTTCTTGGGGCTACACTCTATGGTGTCGGTGTTGACCTTTGGAGTGCTGGCTGCATCTTGGCAGAGCTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAGCAACTGCACAAAATATTTAAATTATGTGGGTCTCCATCTGAGGAATATTGGAAGAAGTATAGATTGCCAAATGCTACACTCTTTAAGCCACAGCAGCCTTATAAACGTTGCCTTTCAGAAACCTTCAAAGATTTCCCACCTTCTTCTTTACCTCTAATAGAAACTCTCCTTGCAATGGATCCAGATGATCGTGGCACTGCCTCAGCTGCTCTTTGTAGTGAATTCTTTGCAACTGAGCCCTATGCTTGTGAACCATCAAGTTTACCGAAGTATCCTCCCAGCAAAGAATTGGATGTAAAACTGAGAGATGAAGAAGCAAGAAGGCTAAAAGCTCAAAGTGGGAAAGCTAACGCTGTTGATGGTGCTCGAAAAGTCAAAACACGTGATCGTGGTCGGGCCATTCCAGCTCCAGATGCCAACGCAGAATTGCAAACAAACATAGATACGGTTCTTATTGGATCTGTATGCCCCATTAAGCAAGATTTCGTGTTTCTCAATTTTCAGAAGTGGAGAGCTGTGACCCATGCAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCTCCACATCAGGATGGAGCTGTTGGATATCCATTAGATTCATCCCGTAAAGCGCCTGTTTCCTTTGGTGGCACTGATGCTTCCTTTGGCTCAGCAATATTTAATTTAAAAGTATCAGGACCTGTTAGAAATCATGCTGCTGCAAGACCTCACGGAGGGAGGAAAACTAGTAAAGCAGACTCCCAGATGGCGTCATCATGGAAATTTATGCGAGCCTTCAAGCCATCATCAATAGGCCCATCAGTGAACTTATTATTTCGGAGCAAATAA 1779 0.4677 MGCVLGTRADGEGRRSDSGTQDHRPRASQRHSVTDGGNAVVVRKEGAAREMEEQGTRRTGDFSGTVPALERRKLRLDPYAKTEHGWPLWLMDVAGEAIRDWSPRRANSFEKLAKIGQGTYSNVYKARDLLTGKIVALKKVRFDNMEPESVKFMAREIILLRRLDHPNVLKLEGLVTSRMSCSLYLVFQYMEHDLAGLAARQGVKFNEPQVKCYVKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLAAFYDPEKKQPMTSRVVTLWYRPPELLLGATLYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRCLSETFKDFPPSSLPLIETLLAMDPDDRGTASAALCSEFFATEPYACEPSSLPKYPPSKELDVKLRDEEARRLKAQSGKANAVDGARKVKTRDRGRAIPAPDANAELQTNIDTVLIGSVCPIKQDFVFLNFQKWRAVTHANAKSKSEKFPPPHQDGAVGYPLDSSRKAPVSFGGTDASFGSAIFNLKVSGPVRNHAAARPHGGRKTSKADSQMASSWKFMRAFKPSSIGPSVNLLFRSK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4784g00017 592 Gene3D Phosphorylase Kinase; domain 1 95 191 - -
Pral4784g00017 592 MobiDBLite consensus disorder prediction 10 30 - -
Pral4784g00017 592 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Pral4784g00017 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Pral4784g00017 592 CDD STKc_CDK9_like 109 393 - -
Pral4784g00017 592 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4784g00017 592 FunFam probable serine/threonine-protein kinase At1g54610 192 433 - -
Pral4784g00017 592 Gene3D Transferase(Phosphotransferase) domain 1 192 433 - -
Pral4784g00017 592 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4784g00017 592 MobiDBLite consensus disorder prediction 426 447 - -
Pral4784g00017 592 SUPERFAMILY Protein kinase-like (PK-like) 103 398 IPR011009 -
Pral4784g00017 592 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4784g00017 592 PANTHER CELL DIVISION PROTEIN KINASE 107 397 - -
Pral4784g00017 592 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Pral4784g00017 592 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4784g00017 Pral-Chr4784 130396 134684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4784g00017 101 425 Core Cell Cycle Gene Families AT5G10270 51.320 3.34e-114 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral4784g00017 Pkinase 1.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4784g00017 K08819 - gmx:100807756 906.36