Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4784g00011 ATGGAAAAGATGAATTTTGTTAGAAATGGAGTGAGCAGATTGCCTCCTGGTTTTCGGTTCCAGCCGACAGATCAAGAACTTGTGTTTCAGTACTTGAAATGCAAGATCTTCTGCCTTCCCTTGCCTGCTTCCATTATTCCTGACCTCAATCTCTGCAACTTCGATCCTTGGGATTTGCCAGGTAACTCTGATGAGGAAGAGAGGCACTTTTTCAGTCCAAAGGAAGCAAAATATCGAAATGGGAATCGCATGAACCGAACAACCACCTCTGGATATTGGAAGGCAACAGGATCAGACAAGAAAATAACTTCTTTAAGAAACAATGACATCGTTGGTATAAGAAAAACCCTTGTTTTTTACCAGGGTAATTCCCCAAACGGCTCTAAAACTGATTGGATCATGCACGAATATCGTCTTGTCTCTGCTTCTTCCAAGTCCGAGGAGGTCGGAGACTGGGTTCTGTGTCGAGTATCCCTCAAGAAAACAAGTGGTGGTGACACGAGGAGGACGAGGAGTCACGTTCAGAATAATAATAATAACAACGACAGGCAAGACATGGTAGGTCAGCCAACATTCTTTGATTTTATGATGCTGCAAAACCAAAACCTCCATGCTTCAGCATCGTCGTCTTGTTCAAGCTCCAACGGTTATGTATCGGAACATGAAGAAACAAGTGGATATACGGGTTTCTAG 693 0.4329 MEKMNFVRNGVSRLPPGFRFQPTDQELVFQYLKCKIFCLPLPASIIPDLNLCNFDPWDLPGNSDEEERHFFSPKEAKYRNGNRMNRTTTSGYWKATGSDKKITSLRNNDIVGIRKTLVFYQGNSPNGSKTDWIMHEYRLVSASSKSEEVGDWVLCRVSLKKTSGGDTRRTRSHVQNNNNNNDRQDMVGQPTFFDFMMLQNQNLHASASSSCSSSNGYVSEHEETSGYTGF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4784g00011 230 MobiDBLite consensus disorder prediction 169 186 - -
Pral4784g00011 230 ProSiteProfiles NAC domain profile. 14 160 IPR003441 GO:0003677|GO:0006355
Pral4784g00011 230 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 201 - -
Pral4784g00011 230 SUPERFAMILY NAC domain 7 160 IPR036093 GO:0003677|GO:0006355
Pral4784g00011 230 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Pral4784g00011 230 MobiDBLite consensus disorder prediction 209 230 - -
Pral4784g00011 230 MobiDBLite consensus disorder prediction 164 186 - -
Pral4784g00011 230 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4784g00011 Pral-Chr4784 112076 113746 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4784g00011 1 230 NAC Transcription Factor Family AT5G13180 50.000 1.71e-73 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4784g00011 NAM 9.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4784g00011 - - aprc:113868555 301.982