Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4784g00008 ATGAATTTTGTTAGAAATGGAGTGAGCAGATTGCCTCCTGGTTTTCGGTTCCAGCCGACAGATCAAGAACTTGTGTTTCAGTACTTGAAATGCAAGATCTTCTGCCTTCCCTTGCCTGCTTCCATTATTCCTGACCTCAATCTCTGCAACTTCGATCCTTGGGATTTGCCAGGTAACTCTGATGAGGAAGAGAGGCACTTTTTCAGTCCAAAGGAAGCAAAATATCGAAATGGGAATCGCATGAACCGAACAACCACCTCTGGATATTGGAAGGCAACAGGATCAGACAAGAAAATAACTTCTTTAAGAAACAATGACATCGTTGGTATAAGAAAAACCCTTGTTTTTTACCAGGGTAATTCCCCAAACGGCTCTAAAACTGATTGGATCATGCACGAATATCGTCTTGTCTCTGCTTCTTCCAAGTCCGAGGAGGTCGGAGACTGGGTTCTGTGTCGAGTATCCCTCAAGAAAACAAGTGGTGGTGACACGAGGAGGACGAGGAGTCACGTTCAGAATAATAATAATAACAACGACAGGCAAGACATGGTAGGTCAGCCAACATTCTTTGATTTTATGATGCTGCAAAACCAAAACCTCCATGCTTCAGCATCGTCGTCTTGTTCAAGCTCCAACGGTTATGTATCGGAACATGAAGAAACAAGTGGATATACGGGTTTCTAG 684 0.4342 MNFVRNGVSRLPPGFRFQPTDQELVFQYLKCKIFCLPLPASIIPDLNLCNFDPWDLPGNSDEEERHFFSPKEAKYRNGNRMNRTTTSGYWKATGSDKKITSLRNNDIVGIRKTLVFYQGNSPNGSKTDWIMHEYRLVSASSKSEEVGDWVLCRVSLKKTSGGDTRRTRSHVQNNNNNNDRQDMVGQPTFFDFMMLQNQNLHASASSSCSSSNGYVSEHEETSGYTGF 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4784g00008 227 Pfam No apical meristem (NAM) protein 12 136 IPR003441 GO:0003677|GO:0006355
Pral4784g00008 227 MobiDBLite consensus disorder prediction 206 227 - -
Pral4784g00008 227 MobiDBLite consensus disorder prediction 161 183 - -
Pral4784g00008 227 SUPERFAMILY NAC domain 7 157 IPR036093 GO:0003677|GO:0006355
Pral4784g00008 227 ProSiteProfiles NAC domain profile. 11 157 IPR003441 GO:0003677|GO:0006355
Pral4784g00008 227 MobiDBLite consensus disorder prediction 166 183 - -
Pral4784g00008 227 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 198 - -
Pral4784g00008 227 Gene3D NAC domain 20 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4784g00008 Pral-Chr4784 93392 113746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4784g00008 1 227 NAC Transcription Factor Family AT5G13180 50.201 1.63e-72 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4784g00008 NAM 9.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4784g00008 - - aprc:113868555 296.204