Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00127 ATGCTGGATCTTAGGAGTGGCCAGTTCAACGGGCCAACTATTGTGGGCATTTTTGGAGACCACTCAAAATATTCGAATGAGGAGACGCTTGATGGAAGGAATTCCAAGTTAAAAATACAGAAACGGCAGAAGTTTCTCTATGTGCGTCGCCCAAAAAGTCTCGATACGCCCGAAAAGCGAGACGCAACCATTAACGTTGAAGCCGATCGCACCATTCATCATTCACCATCGAATACATCAGTAATGGAGAATCACCAGCAAGCCCCACCTCCCTCCGCTTACCCACCTCAGCCCCCTGCTCCTCCTTCTTCCTTCCACCACCTTCTTCAACAACAGCAACAGCAGCTTCACACCTTCTGGACCATCCAGCGCCAAGAGATCGAGCATGTCAACGATTTCAAGAACCACCAGCTCCCTCTCGCTCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCTGCCGAAGCCCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATTCGATCCTGGCTCCACGCCGAAGAGAACAAGAGGCGCACTCTCCAGAAGAACGACATCGCCGCCGCTATCACCCGCACTGATATTTTCGATTTCTTGGTCGATATTGTGCCTAGGGACGAGATCAAGGACGAGGCTGCCCTTGGTGGAATGATGGGGGCACCCGCGAGCGGTGTTCCTTACTACTATCCGTCTATGGGCCAACCTGCCGGCCCTCCCGGGGGCATGATGATTGGACGGCCTGCGGTGGATCCCACCGGAGTCTACGCGCAACCGCCTTCCCAAGCGTGGCAGTCAGTGTGGCAGACGGCGGCGGATGATGGATCCTACGGCAGCGGCGGGAGCAGTGGACAGGGCAATCCTGATGGTCAGAGTTAA 906 0.5508 MLDLRSGQFNGPTIVGIFGDHSKYSNEETLDGRNSKLKIQKRQKFLYVRRPKSLDTPEKRDATINVEADRTIHHSPSNTSVMENHQQAPPPSAYPPQPPAPPSSFHHLLQQQQQQLHTFWTIQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAALGGMMGAPASGVPYYYPSMGQPAGPPGGMMIGRPAVDPTGVYAQPPSQAWQSVWQTAADDGSYGSGGSSGQGNPDGQS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00127 301 Gene3D Histone, subunit A 103 215 IPR009072 GO:0046982
Pral4782g00127 301 MobiDBLite consensus disorder prediction 50 68 - -
Pral4782g00127 301 MobiDBLite consensus disorder prediction 267 301 - -
Pral4782g00127 301 MobiDBLite consensus disorder prediction 50 104 - -
Pral4782g00127 301 MobiDBLite consensus disorder prediction 70 87 - -
Pral4782g00127 301 Pfam Core histone H2A/H2B/H3/H4 106 200 IPR007125 GO:0003677
Pral4782g00127 301 SUPERFAMILY Histone-fold 83 209 IPR009072 GO:0046982
Pral4782g00127 301 MobiDBLite consensus disorder prediction 263 301 - -
Pral4782g00127 301 MobiDBLite consensus disorder prediction 89 103 - -
Pral4782g00127 301 FunFam Nuclear transcription factor Y subunit gamma 106 215 - -
Pral4782g00127 301 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 95 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00127 Pral-Chr4782 973560 978058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00127 103 284 CCAAT-HAP5 Transcription Factor Family AT3G48590 88.649 6.15e-108 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral4782g00127 Histone 1.7e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00127 - - pcin:129320575 316.62