Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00126 ATGGAGAATCACCAGCAAGCCCCACCTCCCTCCGCTTACCCACCTCAGCCCCCTGCTCCTCCTTCTTCCTTCCACCACCTTCTTCAACAACAGCAACAGCAGCTTCACACCTTCTGGACCATCCAGCGCCAAGAGATCGAGCATGTCAACGATTTCAAGAACCACCAGCTCCCTCTCGCTCGCATCAAGAAGATCATGAAGGCCGACGAGGACGTCCGCATGATCTCTGCCGAAGCCCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACCATTCGATCCTGGCTCCACGCCGAAGAGAACAAGAGGCGCACTCTCCAGAAGAACGACATCGCCGCCGCTATCACCCGCACTGATATTTTCGATTTCTTGGTCGATATTGTGCCTAGGGACGAGATCAAGGACGAGGCTGCCCTTGGTGGAATGATGGGGGCACCCGCGAGCGGTGTTCCTTACTACTATCCGTCTATGGGCCAACCTGCCGGCCCTCCCGGGGGCATGATGATTGGACGGCCTGCGGTGGATCCCACCGGAGTCTACGCGCAACCGCCTTCCCAAGCGTGGCAGTCAGTGTGGCAGACGGCGGCGGATGATGGATCCTACGGCAGCGGCGGGAGCAGTGGACAGGGCAATCCTGATGGTCAGAGTTAA 663 0.5867 MENHQQAPPPSAYPPQPPAPPSSFHHLLQQQQQQLHTFWTIQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAALGGMMGAPASGVPYYYPSMGQPAGPPGGMMIGRPAVDPTGVYAQPPSQAWQSVWQTAADDGSYGSGGSSGQGNPDGQS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00126 220 SUPERFAMILY Histone-fold 8 128 IPR009072 GO:0046982
Pral4782g00126 220 Pfam Core histone H2A/H2B/H3/H4 27 119 IPR007125 GO:0003677
Pral4782g00126 220 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 29 149 - -
Pral4782g00126 220 Gene3D Histone, subunit A 22 134 IPR009072 GO:0046982
Pral4782g00126 220 MobiDBLite consensus disorder prediction 8 22 - -
Pral4782g00126 220 MobiDBLite consensus disorder prediction 182 220 - -
Pral4782g00126 220 MobiDBLite consensus disorder prediction 186 220 - -
Pral4782g00126 220 MobiDBLite consensus disorder prediction 1 24 - -
Pral4782g00126 220 FunFam Nuclear transcription factor Y subunit gamma 25 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00126 Pral-Chr4782 973560 991322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00126 22 219 CCAAT-HAP5 Transcription Factor Family AT3G48590 88.235 1.72e-108 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pral4782g00126 Histone 1.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00126 - - pcin:129320575 316.62