Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00104 ATGGCAGTCACATTGGCTAACGTTAACTCTGCTTCTGGCTTGAAAAAGCTCGATGAATACCTTCTCACTCGCAGTTATATAACTGGGTATCAAGCTTCAAAGGACGATATTACAGTGCATGCAGCCCTGTCTAAGGCCCCATCGGCTGAATATGTGAACGCTTCCCGGTGGTACAAGCACATTGATGCTCTATTGAGAATCTCGGGTGTATCTGGTGACGGATGTGGAGTCAAAGTGGAGGGATCTCTTCCCGTAGCAGACGAAACCATTGCCACTCCTCCACCTGCTGACACAAAGGCCACATCCGCTGAGGATGATGATGATGATGATGTGGATTTATTTGGTGAAGAGACTGAAGAAGAAAAGAAGGCTGCTGAAGAACGGGCAGCTGCCGTGAAGGCATCTTCAAAGAAGAAAGAATCTGGGAAGTCATCTGTTTTGCTGGATGTGAAGCCCTGGGATGACGAGACAGACATGAAGAAGCTTGAAGAAGCAGTGAGAGGGGTTCAGATGGAAGGATTGCATTGGGGTGCATCCAAACTTGCCCCCGTTGGGTACGGTATCAAGAAGCTGCAAATTATGCTTACTATAGTGGATGACCTGGTCTCTGTTGACAGCCTCATTGAGGAACATCTCATGAGCGAGCCAGTTAATGAATATGTCCAGAGCTGTGACATTGTGGCCTTCAATAAAATATAA 699 0.4707 MAVTLANVNSASGLKKLDEYLLTRSYITGYQASKDDITVHAALSKAPSAEYVNASRWYKHIDALLRISGVSGDGCGVKVEGSLPVADETIATPPPADTKATSAEDDDDDDVDLFGEETEEEKKAAEERAAAVKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRGVQMEGLHWGASKLAPVGYGIKKLQIMLTIVDDLVSVDSLIEEHLMSEPVNEYVQSCDIVAFNKI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00104 232 CDD EF1B 146 232 IPR014038 GO:0003746|GO:0006414
Pral4782g00104 232 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 221 232 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pral4782g00104 232 MobiDBLite consensus disorder prediction 117 136 - -
Pral4782g00104 232 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 232 - -
Pral4782g00104 232 Gene3D - 2 73 - -
Pral4782g00104 232 FunFam Elongation factor 1-beta 1 like 137 232 - -
Pral4782g00104 232 SUPERFAMILY GST C-terminal domain-like 8 67 IPR036282 -
Pral4782g00104 232 Coils Coil 115 135 - -
Pral4782g00104 232 Pfam EF-1 guanine nucleotide exchange domain 145 232 IPR014038 GO:0003746|GO:0006414
Pral4782g00104 232 SUPERFAMILY eEF-1beta-like 140 232 IPR036219 -
Pral4782g00104 232 SMART EF1_GNE_2 143 232 IPR014038 GO:0003746|GO:0006414
Pral4782g00104 232 Gene3D - 136 232 IPR014717 -
Pral4782g00104 232 MobiDBLite consensus disorder prediction 86 111 - -
Pral4782g00104 232 FunFam Elongation factor 1-delta 1 3 78 - -
Pral4782g00104 232 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 107 115 IPR001326 GO:0003746|GO:0005853|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00104 Pral-Chr4782 821238 823759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00104 5 232 Eukaryotic Initiation Factors Gene Family AT2G18110 79.386 8.96e-117 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00104 K03232 - pvy:116136344 337.035