Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00101 ATGGACATCCTGATAGAGTCTACCTCCGCCGCTCATTTCTCTGGTCGGCGTCCTTCCATGACGACGTCGTCTTCTTCATTTTTATCTCCGACTGATGACGGTCTCGTTGGCCTTACGCAGCCATTTGTGATCGGGGTCTCTGGAGGTACGGCATCAGGCAAGACCTCTGTGTGTGACATGATCATTCAACAACTGCAAGATCATAGAGTGGTGGTAGTCTGTCAGGACTCATTCTACCGTGGTTTGACAGAGAGAGAGTTGAAACGCGTCCATGAATATAATTTTGATCATCCTGACGCCTTTGATACTGAGGAACTTGTGAAGTGTATCAGCAAGCTCAAATCTGGACAGTCTGTTCATGTGCCAGTATATGATTTTAAGACACATCAGCGGTCGTCTGAAAAATATACGCAGGTCAATGCATCTGAAGTAATCATTTTGGAGGGCATATTGGTTTTTCATGAGCAACGTGTGCGCGACATGATGAATATGAAAATCTTTGTCGATACAGATGCTGATGTAAGGCTTGCCCGCAGAATAAGACGGGATACCGTCGACAGGGGCAGAGATATGCAGTCGTATTCAAAATTTGTCAAGCCCGCCTTTGATGATTTCATTCTTCCAACCAAAAAATATGCCGATATCATAATACCTCGTGGGAAAGAGAATGTGGTAGCAGTTGACTTGATCGTTCAACATATCCGCACTAAGCTTGGCCAACATAACCTCTGCAAAATATATCCGAATTTGAATGTTATCCATTCTACGTACCAGATCAGAGGCATGCACACTCTAATTCGTGACAAGAATATATCAAAGCACGACTTTGTTTTTTATTCAGATCGGCTTATTCGTTTGGTACTGGAACACGGTCTCGGCCATTTGCCATTTACAGAGAAGCAGGTTATCACACCCACAGGATCAATTTACACTGGCGTCGATTTCTGTAAGAGATTGTGCGGTGTATCCGTCATTCGTAGTGGTGAAAGCATGGAGAATGCTTTGCGCGCATGTTGTAAAGGAATCAAAATAGGAAAAATTCTCATCCACCACGAAGGAGGTGATGAGACCCAGCTCATTTATGAGAAGCTTCCGAAAGATATTTCAGAGAGACATGTTCTCCTTTTGGACCCAGTACTTGGTACAGGTAACTCTGCCAGCCAAGCCATTGAGCTTCTTATACGAAATGGAGTTCCGGAGTCCCGCATAATATTCCTCAACCTCATCTCCGCTCCTGAGGGAATACACCGTGTATGCAAACGTTTTCCATACCTGAAAATAGTCACTTCGGAGATTGAAGTTGGACTAAATGAAGAGTTTCGAGTTATACCAGGGTTGGGAGAATTTGGAGACCGCTATTTCGGTACTGAAGAGTAA 1377 0.4415 MDILIESTSAAHFSGRRPSMTTSSSSFLSPTDDGLVGLTQPFVIGVSGGTASGKTSVCDMIIQQLQDHRVVVVCQDSFYRGLTERELKRVHEYNFDHPDAFDTEELVKCISKLKSGQSVHVPVYDFKTHQRSSEKYTQVNASEVIILEGILVFHEQRVRDMMNMKIFVDTDADVRLARRIRRDTVDRGRDMQSYSKFVKPAFDDFILPTKKYADIIIPRGKENVVAVDLIVQHIRTKLGQHNLCKIYPNLNVIHSTYQIRGMHTLIRDKNISKHDFVFYSDRLIRLVLEHGLGHLPFTEKQVITPTGSIYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHHEGGDETQLIYEKLPKDISERHVLLLDPVLGTGNSASQAIELLIRNGVPESRIIFLNLISAPEGIHRVCKRFPYLKIVTSEIEVGLNEEFRVIPGLGEFGDRYFGTEE 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00101 458 Pfam Phosphoribulokinase / Uridine kinase family 43 225 IPR006083 GO:0005524|GO:0016301
Pral4782g00101 458 SUPERFAMILY PRTase-like 240 457 IPR029057 -
Pral4782g00101 458 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 230 IPR027417 -
Pral4782g00101 458 Gene3D - 38 240 IPR027417 -
Pral4782g00101 458 NCBIfam uridine kinase 42 237 IPR000764 -
Pral4782g00101 458 PANTHER URIDINE KINASE 39 367 - -
Pral4782g00101 458 FunFam Uridine kinase 38 240 - -
Pral4782g00101 458 FunFam Uridine kinase 241 456 - -
Pral4782g00101 458 PRINTS Uridine kinase signature 116 131 - -
Pral4782g00101 458 PRINTS Uridine kinase signature 71 82 - -
Pral4782g00101 458 PRINTS Uridine kinase signature 41 58 - -
Pral4782g00101 458 PRINTS Uridine kinase signature 187 198 - -
Pral4782g00101 458 PRINTS Uridine kinase signature 173 183 - -
Pral4782g00101 458 CDD PRTases_typeI 314 429 IPR000836 -
Pral4782g00101 458 CDD UMPK 43 237 IPR000764 -
Pral4782g00101 458 Pfam Uracil phosphoribosyltransferase 255 456 - -
Pral4782g00101 458 Gene3D - 241 456 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00101 Pral-Chr4782 781652 787844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00101 1 458 PRT Gene Family AT3G27190 75.314 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00101 K00876 - gmx:100816209 716.072