Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00092 ATGGGGTTTCATAACTTGGTTCTGCTACTCTGTTTTGCTTCTTGGTGCTTGTGTTCTGCTTCTCAGCTGCAATCATCTCAAGTCCAAGTGCTTCTTCAGCTGAAGAAGCACTTGGAGTACCCAAAACAACTAGATATATGGAAGAATCGTTGGTCATCTTTTTGCTCTTCTTCTCCTTCTTCACAAGTAAATGTCACATGCCAGGGAAGTTTTGTCACTGAACTAAGCATAGTGGGCGATGCTAACCCATCAAAGGTTAGTGATTTTAATGGTTCTCCTATTCCGAATCAGACATTGTCAGAAAACTTCTCTATGGATTCTTTTGTGGCTACTCTTGCCAGGTTAACTAGCTTGAAAGTCCTTCGTCTCGTTTCTTTGGGCATGTGGGGTCCGCTACCTAATAAAATCCAGAGACTAAATGAGCTTGACCATTTGGACTTGAGTTCAAACTTTCTCTATGGGTCAATCCCTCCAAAGATTTCTAACATTGCCAATCTTCGAGTTCTTGCACTCGATGACAACTTTTTCAACAGTACAATTCCCGTTTGGTTCAATTCTTTGACTAATCTGACAGTTCTTGGCTTGAGTAATAACAGATTGAAGGGTCAGTTAGGAGACTTTAGTGCTTTGAGTGCTTTAGAAGTGCTGGATTTGAGAGAGAATAGATTGGCCTCTACACTGCCAAATATGCCAAAAGGGTTAATGAGGCTTTTTCTGAGCAAAAACTCGTTCTCAGGTGAAATTCCCGAGCAATATGGTCAGCTAAATGGACTTAAACAGCTAGACATTTCATTCAATACACTCACAGGATCGCCTCCTTCTGAGATTTTCTCTTTGCCCAGTATCGTTTTCTTGAATTTGGCATCAAATATGTTAAGTGGCTCCCTTCATAGCAATCTAAAATGTGGCAGCAAACTCAGATTTGTTGATATCTCACACAACAAATTGATGGGTTTCTTGCCTTCTTGTCTGGGAACAGAGTCAGAAAACAGGGTTGTTAACCTTGAAGGAAATTGCTTATCCTCCAAGTTTCAGCATCAGCATGCAGTATCATACTGCACAGAGGTTCATGTGAAGAAGAACACTTTCAGAGTTGGAATTTTAGTTGGTGTAATTATTGGAGCTTTTCTAATAATAGTGGTTCTGGCTCTGGGCATTGTTGTGTGCGGAAGATGTTGCCATAGAGGAATCTCAGAGCAGCATCTATTGAATAAAACAGTTCAAGATAGCTCGACAACTGCAGTTGGGCTCTCCAGTGAGATTCTGGCTAATGCAAGATTTATTTCTCAAGCTTCCAAGTTAGGCAAAGAAGAGCTGCCCGTGTGTCGGCCCTATTCTCTTGAAGAGCTCAAACAAGCTACAAATAATTTTCACGACTCTACCTTTATGGGTGAAAATTTATACGGGAAGCTTTACAGAGGAAAGCTAGAAAATGGGAAGCAAGTTACAATAAGGAGCCTGCCATTGTCAAAAAAGTATTCATTCAGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAGGCTTCGTCATCCTCATCTTGTATCTCTTTTGGGTCACTGCATTGATGGTGTTGTAGCAGAAAATAATGGCACAAACGTATTTCTCATATATGAATACGTTCACAATGGAAGCTTCCGGAGCTACCTATCTGGAACAAGTTCCGGCAAGGTCTTCAGTTGGTCTGAGAGATTGGCGGTTTTGGTTAGCATTGCCAAGGCAGTTCACTTTCTGCACACCGGGATGATACCCGGCTTCGTCAAGAACCAACTCAAAACGAACAATATATTGCTTAATGAGAATTGGACTGCGAAATTGAGTGACTATGGATTGTCCATTATCTCAGAGGAAGCTGACATGAGTGAGGGAAAAGGAGAGAACGCTGGATCATGGGAAATGAAAAGATTAGAAGATGATATTTATGGCTTTGGATTTATACTTCTTGAGGCACTTCTTGGACCTTCAGTATCTGCTAAAAAAGAAGCAATCTTGCCAAATGTAATGGCGTGTTTCAACAGTGAAGATGGGTGGAAGCAGATAGTGGACCCAGCAGTGCAAGCAAGTTGCTGCCAAGAATCTTTGTTCATTGTGATTTCCATCACAAACAAAAGCATTTCCACTGAATCTTGGAGCCGACCATCCATTGAAGATGTCCTTTGGAACTTACAATATGCTTCTCAAGTTCAAGCAAATTCTGATGCAGATCACAGATTAAATCCTACCACACCACATCATCAGTAA 2238 0.4115 MGFHNLVLLLCFASWCLCSASQLQSSQVQVLLQLKKHLEYPKQLDIWKNRWSSFCSSSPSSQVNVTCQGSFVTELSIVGDANPSKVSDFNGSPIPNQTLSENFSMDSFVATLARLTSLKVLRLVSLGMWGPLPNKIQRLNELDHLDLSSNFLYGSIPPKISNIANLRVLALDDNFFNSTIPVWFNSLTNLTVLGLSNNRLKGQLGDFSALSALEVLDLRENRLASTLPNMPKGLMRLFLSKNSFSGEIPEQYGQLNGLKQLDISFNTLTGSPPSEIFSLPSIVFLNLASNMLSGSLHSNLKCGSKLRFVDISHNKLMGFLPSCLGTESENRVVNLEGNCLSSKFQHQHAVSYCTEVHVKKNTFRVGILVGVIIGAFLIIVVLALGIVVCGRCCHRGISEQHLLNKTVQDSSTTAVGLSSEILANARFISQASKLGKEELPVCRPYSLEELKQATNNFHDSTFMGENLYGKLYRGKLENGKQVTIRSLPLSKKYSFRNFKLRLDLLARLRHPHLVSLLGHCIDGVVAENNGTNVFLIYEYVHNGSFRSYLSGTSSGKVFSWSERLAVLVSIAKAVHFLHTGMIPGFVKNQLKTNNILLNENWTAKLSDYGLSIISEEADMSEGKGENAGSWEMKRLEDDIYGFGFILLEALLGPSVSAKKEAILPNVMACFNSEDGWKQIVDPAVQASCCQESLFIVISITNKSISTESWSRPSIEDVLWNLQYASQVQANSDADHRLNPTTPHHQ 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00092 745 SMART LRR_typ_2 255 279 IPR003591 -
Pral4782g00092 745 SMART LRR_typ_2 210 233 IPR003591 -
Pral4782g00092 745 SMART LRR_typ_2 139 163 IPR003591 -
Pral4782g00092 745 SMART LRR_typ_2 187 209 IPR003591 -
Pral4782g00092 745 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Pral4782g00092 745 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 540 740 - -
Pral4782g00092 745 Gene3D Ribonuclease Inhibitor 234 369 IPR032675 -
Pral4782g00092 745 Gene3D Phosphorylase Kinase; domain 1 421 539 - -
Pral4782g00092 745 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 109 204 - -
Pral4782g00092 745 Pfam Leucine rich repeat 165 223 IPR001611 GO:0005515
Pral4782g00092 745 Pfam Leucine rich repeat 233 292 IPR001611 GO:0005515
Pral4782g00092 745 ProSiteProfiles Protein kinase domain profile. 457 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00092 745 SUPERFAMILY L domain-like 26 363 - -
Pral4782g00092 745 Gene3D Ribonuclease Inhibitor 24 233 IPR032675 -
Pral4782g00092 745 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 420 539 - -
Pral4782g00092 745 Pfam Protein tyrosine and serine/threonine kinase 463 621 IPR001245 GO:0004672|GO:0006468
Pral4782g00092 745 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 90 722 - -
Pral4782g00092 745 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 234 358 - -
Pral4782g00092 745 Gene3D Transferase(Phosphotransferase) domain 1 540 740 - -
Pral4782g00092 745 SUPERFAMILY Protein kinase-like (PK-like) 440 722 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00092 Pral-Chr4782 718982 722724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00092 7 668 Miscellaneous Gene Families AT5G14210 50.429 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pral4782g00092 PK_Tyr_Ser-Thr 2.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00092 - - pcin:129308796 1290.79