Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00088 ATGACGAGCGGCGGACTCCGAATTTTCTCGATCGCGTTCATCTTGAGATTCTTGACGCTGCTGTGCTTCTTCCTTTCGCTCTTCTTCGATTTCTGTGCCGCCGCAAGGCGGGACAATGTTCTGAGGAAAAGAGAGTCTTACAAATATAGTTCCATTAAGGAATTTGATAATTATATTAACGGTTCTTCTGGCGCGGCAGTGCATCGATCTAGTAGCCGCCACCACGTCACACATAAGAACGGTCGAAGATCTTCCGATCGTGATGATTCAGGTCCTGGACGAACTGAGTCTTATGGTAAAAAAGAACAGAGCGAGCAGGGTAAGTTGCATGGAGATAATGGGAAATATGCACCTGCATCTGTGTTTCAGGAAGATTGTGGTGAAGTTGTGGACGCTGAAACTCATGCACCACCGGGGAAGAGAAGAAAAATATCTCCAATTGTCTGGAACTTAGCAGAAAAGGAGGTAAAAATATCTGATAACAGGACAGCACAAGCGACTGCTTTGTCTCCCTTTTGTCCATCCCGACAAAGCTCTCATGGGATCACTGGTCTATTTTATGGCGGAGCTGTTAATTCCGAATCTCCTGCTGATTCCTCTAGTGCATTACCTCAAGGACGTTCAGACAATGAGGGTGAATATGTTGATCAGTCTGATAAGAAACACGTGCAAGGTTGGAATATCACAATGTCAAGATGGTTGTCGGATGATTATTCCCCACCGAATGCATCTGATGATGATTACATGGATGGAAAAGAGACGTCAAGCCCAGAAAGTGGTGAGTTCATATGTGAAAGTTCTGAAGGCAAAAAATCCATATCATCAAGAAATAGTGCAGGAGTTGATTGTTGCTGCACATCAAGTAATAAAGAAGTTAATAGTTCCGAAAAGGAATTACTTTTGGATACTATGGATGATGATGAGGAAGATAGTGAAACTTCTAATGTTACTCACCCTTCATCAGATCCTGAAGACGGGGGCAGTTTAATAGTGGTGCCGAGAAACATAAACAGCATCCAGAGCTGCAGAAGTGTTTTAGAATTTGAAATGATCAAGAAAATAAACGAAGGAACTTATGGTATTGTCTACAAAGCTAAGGATAAGAAAACCGGGGAAATTGTAGCATTAAAGAAGGTGAAGATGAATATGGATAGAGATGGCTTTCCATTGTCCTCTTTGAGGGAAATAAATATTCTCTCATCTTTTAATCATCCTTCTATTGTGGAAGTTAAAGAAGTTGTTGTGGATGATTTTGATGGTGTTTTTATGGTAATGGAGTATATGGAGTATGACCTTAAAGGGCTGATACAGAAGATGAAGCGACCATTTAGTATAGGTGAAGTAAAATCCTTGATGATGAAACTTCTCAAGGGTGTGAAGTATCTCCATGACAATTGGGTTCTTCACAGAGACTTGAAGACATCAAATATTCTGTTAAATAAGGAGGGTGAGCTAAGAATATGTGACTTTGGTTTATCTCGCCATTATGGAAGCCCACTCAAGCCATATACTCCTCTTGTGGTTACTCTGTGGTACAGGGCTCCTGAGCTTCTGCTAGGTGCTAAGGAATACTCAACAGCGATTGATATGTGGTCAATTGGTTGCATAATGGCTGAATTAGTTGCCAAGTCGCCTCTATTCCAGGGAAAATCTGAAATTGAGCAGCTTAATAACATTTTCCAAACCTTGGGCACACCTAATGAAAAGATTTGGCCAGGAGTATCCAAATTATCTGGATTTAAGCCCAATTTTGTGAAGCAGCCGCACAATCTGTTGCGGAAGAAGTTTCCAGCTGCATCCTTCATTGGGTCACCTGTTCTTTCTGAATTGGGATTTGACTTGTTGAGCAAGCTTCTGACTTATGACCCTGAAAAGAGGATATCTGCAGAAGCTGCTCTTCTTCATGACTGGTTCCGTGAAGCCCCTCTTCCCAAATCTGACTTCAATATCACATTACCTTCACAGCATTGCTAG 1974 0.4174 MTSGGLRIFSIAFILRFLTLLCFFLSLFFDFCAAARRDNVLRKRESYKYSSIKEFDNYINGSSGAAVHRSSSRHHVTHKNGRRSSDRDDSGPGRTESYGKKEQSEQGKLHGDNGKYAPASVFQEDCGEVVDAETHAPPGKRRKISPIVWNLAEKEVKISDNRTAQATALSPFCPSRQSSHGITGLFYGGAVNSESPADSSSALPQGRSDNEGEYVDQSDKKHVQGWNITMSRWLSDDYSPPNASDDDYMDGKETSSPESGEFICESSEGKKSISSRNSAGVDCCCTSSNKEVNSSEKELLLDTMDDDEEDSETSNVTHPSSDPEDGGSLIVVPRNINSIQSCRSVLEFEMIKKINEGTYGIVYKAKDKKTGEIVALKKVKMNMDRDGFPLSSLREINILSSFNHPSIVEVKEVVVDDFDGVFMVMEYMEYDLKGLIQKMKRPFSIGEVKSLMMKLLKGVKYLHDNWVLHRDLKTSNILLNKEGELRICDFGLSRHYGSPLKPYTPLVVTLWYRAPELLLGAKEYSTAIDMWSIGCIMAELVAKSPLFQGKSEIEQLNNIFQTLGTPNEKIWPGVSKLSGFKPNFVKQPHNLLRKKFPAASFIGSPVLSELGFDLLSKLLTYDPEKRISAEAALLHDWFREAPLPKSDFNITLPSQHC 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00088 657 FunFam Cyclin-dependent kinase G-2 430 657 - -
Pral4782g00088 657 MobiDBLite consensus disorder prediction 193 207 - -
Pral4782g00088 657 SMART serkin_6 348 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00088 657 Gene3D Phosphorylase Kinase; domain 1 333 429 - -
Pral4782g00088 657 FunFam cyclin-dependent kinase G-2 isoform X1 333 429 - -
Pral4782g00088 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Pral4782g00088 657 MobiDBLite consensus disorder prediction 66 115 - -
Pral4782g00088 657 MobiDBLite consensus disorder prediction 304 330 - -
Pral4782g00088 657 SUPERFAMILY Protein kinase-like (PK-like) 347 644 IPR011009 -
Pral4782g00088 657 MobiDBLite consensus disorder prediction 193 221 - -
Pral4782g00088 657 MobiDBLite consensus disorder prediction 81 109 - -
Pral4782g00088 657 Pfam Protein kinase domain 348 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00088 657 MobiDBLite consensus disorder prediction 233 275 - -
Pral4782g00088 657 CDD STKc_CDC2L1 342 638 IPR045267 GO:0004674|GO:0005524|GO:0006468
Pral4782g00088 657 PANTHER CELL DIVISION PROTEIN KINASE 347 644 - -
Pral4782g00088 657 ProSiteProfiles Protein kinase domain profile. 348 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00088 657 Gene3D Transferase(Phosphotransferase) domain 1 430 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00088 Pral-Chr4782 697318 702680 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00088 339 644 Core Cell Cycle Gene Families AT5G10270 45.706 3.27e-86 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Pral4782g00088 Pkinase 5.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00088 K08818 - qsa:O6P43_030747 639.802