LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4782g00088	ATGACGAGCGGCGGACTCCGAATTTTCTCGATCGCGTTCATCTTGAGATTCTTGACGCTGCTGTGCTTCTTCCTTTCGCTCTTCTTCGATTTCTGTGCCGCCGCAAGGCGGGACAATGTTCTGAGGAAAAGAGAGTCTTACAAATATAGTTCCATTAAGGAATTTGATAATTATATTAACGGTTCTTCTGGCGCGGCAGTGCATCGATCTAGTAGCCGCCACCACGTCACACATAAGAACGGTCGAAGATCTTCCGATCGTGATGATTCAGGTCCTGGACGAACTGAGTCTTATGGTAAAAAAGAACAGAGCGAGCAGGGTAAGTTGCATGGAGATAATGGGAAATATGCACCTGCATCTGTGTTTCAGGAAGATTGTGGTGAAGTTGTGGACGCTGAAACTCATGCACCACCGGGGAAGAGAAGAAAAATATCTCCAATTGTCTGGAACTTAGCAGAAAAGGAGGTAAAAATATCTGATAACAGGACAGCACAAGCGACTGCTTTGTCTCCCTTTTGTCCATCCCGACAAAGCTCTCATGGGATCACTGGTCTATTTTATGGCGGAGCTGTTAATTCCGAATCTCCTGCTGATTCCTCTAGTGCATTACCTCAAGGACGTTCAGACAATGAGGGTGAATATGTTGATCAGTCTGATAAGAAACACGTGCAAGGTTGGAATATCACAATGTCAAGATGGTTGTCGGATGATTATTCCCCACCGAATGCATCTGATGATGATTACATGGATGGAAAAGAGACGTCAAGCCCAGAAAGTGGTGAGTTCATATGTGAAAGTTCTGAAGGCAAAAAATCCATATCATCAAGAAATAGTGCAGGAGTTGATTGTTGCTGCACATCAAGTAATAAAGAAGTTAATAGTTCCGAAAAGGAATTACTTTTGGATACTATGGATGATGATGAGGAAGATAGTGAAACTTCTAATGTTACTCACCCTTCATCAGATCCTGAAGACGGGGGCAGTTTAATAGTGGTGCCGAGAAACATAAACAGCATCCAGAGCTGCAGAAGTGTTTTAGAATTTGAAATGATCAAGAAAATAAACGAAGGAACTTATGGTATTGTCTACAAAGCTAAGGATAAGAAAACCGGGGAAATTGTAGCATTAAAGAAGGTGAAGATGAATATGGATAGAGATGGCTTTCCATTGTCCTCTTTGAGGGAAATAAATATTCTCTCATCTTTTAATCATCCTTCTATTGTGGAAGTTAAAGAAGTTGTTGTGGATGATTTTGATGGTGTTTTTATGGTAATGGAGTATATGGAGTATGACCTTAAAGGGCTGATACAGAAGATGAAGCGACCATTTAGTATAGGTGAAGTAAAATCCTTGATGATGAAACTTCTCAAGGGTGTGAAGTATCTCCATGACAATTGGGTTCTTCACAGAGACTTGAAGACATCAAATATTCTGTTAAATAAGGAGGGTGAGCTAAGAATATGTGACTTTGGTTTATCTCGCCATTATGGAAGCCCACTCAAGCCATATACTCCTCTTGTGGTTACTCTGTGGTACAGGGCTCCTGAGCTTCTGCTAGGTGCTAAGGAATACTCAACAGCGATTGATATGTGGTCAATTGGTTGCATAATGGCTGAATTAGTTGCCAAGTCGCCTCTATTCCAGGGAAAATCTGAAATTGAGCAGCTTAATAACATTTTCCAAACCTTGGGCACACCTAATGAAAAGATTTGGCCAGGAGTATCCAAATTATCTGGATTTAAGCCCAATTTTGTGAAGCAGCCGCACAATCTGTTGCGGAAGAAGTTTCCAGCTGCATCCTTCATTGGGTCACCTGTTCTTTCTGAATTGGGATTTGACTTGTTGAGCAAGCTTCTGACTTATGACCCTGAAAAGAGGATATCTGCAGAAGCTGCTCTTCTTCATGACTGGTTCCGTGAAGCCCCTCTTCCCAAATCTGACTTCAATATCACATTACCTTCACAGCATTGCTAG	1974	0.4174	MTSGGLRIFSIAFILRFLTLLCFFLSLFFDFCAAARRDNVLRKRESYKYSSIKEFDNYINGSSGAAVHRSSSRHHVTHKNGRRSSDRDDSGPGRTESYGKKEQSEQGKLHGDNGKYAPASVFQEDCGEVVDAETHAPPGKRRKISPIVWNLAEKEVKISDNRTAQATALSPFCPSRQSSHGITGLFYGGAVNSESPADSSSALPQGRSDNEGEYVDQSDKKHVQGWNITMSRWLSDDYSPPNASDDDYMDGKETSSPESGEFICESSEGKKSISSRNSAGVDCCCTSSNKEVNSSEKELLLDTMDDDEEDSETSNVTHPSSDPEDGGSLIVVPRNINSIQSCRSVLEFEMIKKINEGTYGIVYKAKDKKTGEIVALKKVKMNMDRDGFPLSSLREINILSSFNHPSIVEVKEVVVDDFDGVFMVMEYMEYDLKGLIQKMKRPFSIGEVKSLMMKLLKGVKYLHDNWVLHRDLKTSNILLNKEGELRICDFGLSRHYGSPLKPYTPLVVTLWYRAPELLLGAKEYSTAIDMWSIGCIMAELVAKSPLFQGKSEIEQLNNIFQTLGTPNEKIWPGVSKLSGFKPNFVKQPHNLLRKKFPAASFIGSPVLSELGFDLLSKLLTYDPEKRISAEAALLHDWFREAPLPKSDFNITLPSQHC	657

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pral4782g00088	657	FunFam	Cyclin-dependent kinase G-2	430	657	-	-
Pral4782g00088	657	MobiDBLite	consensus disorder prediction	193	207	-	-
Pral4782g00088	657	SMART	serkin_6	348	638	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pral4782g00088	657	Gene3D	Phosphorylase Kinase; domain 1	333	429	-	-
Pral4782g00088	657	FunFam	cyclin-dependent kinase G-2 isoform X1	333	429	-	-
Pral4782g00088	657	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	467	479	IPR008271	GO:0004672\|GO:0006468
Pral4782g00088	657	MobiDBLite	consensus disorder prediction	66	115	-	-
Pral4782g00088	657	MobiDBLite	consensus disorder prediction	304	330	-	-
Pral4782g00088	657	SUPERFAMILY	Protein kinase-like (PK-like)	347	644	IPR011009	-
Pral4782g00088	657	MobiDBLite	consensus disorder prediction	193	221	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4782g00088	Pral-Chr4782	697318	702680	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4782g00088	339	644	Core Cell Cycle Gene Families	AT5G10270	45.706	3.27e-86	277

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_CDK-PITSLRE	Pral4782g00088		Pkinase	5.7e-72	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4782g00088	K08818		-	qsa:O6P43_030747	639.802

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