Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00083 ATGATTCCTCTTTATAGAGCCCTCAAAAGAGATTTAAGTGATAATAATGATCATAGTCCTATGATAGGCCATGGTTTTCATAATTCCTCTGTTGGGTGCGTTACCTATCCTCATTTGCTTCCTGTTTTTGAAACCAGAACTTCTCCTCCTCCTTGGACCCTTCCTTTTTCGGATGAAACCAAAGGAAATAATAACAAGAGGTTGAAGAAAGATCCAAGCATCCCAGAAGTCACTGGAGATTATAGAAGCTTTTCTTCAAGCAGTGGAAGTGAAGATTGCTATAGTAGTCTCAGCAGAAGTAACAGTGTGAATAGCCTTCCAAAGCTGCATTTCAGAGACCACATATGGACTATTACTCAGAGATATCTTGCTTCTGAAGAGGCAGCACAGAAAGACATGATCAATCCTGAGGTAAGTGAAGCTGAAGAACAAGACGATCGGTATTGTGCTGATGGGATGAGACTTGTTCAGCTTCTTGTTCATTGTGCTGAAGGTGTGGCTTGTCGTGATAAATCACATTCTTCAATTTTGCTATCTGAACTGAGATCAAATGCATTGGTCTTTGGCTCTCCATTTCAGCGAGTCGCTTCTTGTTTTGCACAAGGGCTATCTGATCGGCTCGCGATGGTTCAACCAGTTGGGGCTGTGGGGAATATGGAACCACTGACGAACATTATGGACATAGCCTCAGAAGAAATGGAAGAAGCATTTAAATTGGTTTATGAGATTTGCCCACACATTAAGTTTGGTCACTTTGTAGCTAATTCCACAATATTGGAAGCCTTTGAAAACCACAGTTTTGTGCATGTGGTGGACCTTGGGATGACTCTTGGTCTTCCCCATGGCCACCAATGGAGGGGATTGATTAAGAGCCTGGCTAAACGCCCAGGCCAGCTAGTTCGCCGCCTTCGAATTACCGGCGTTGGCCTTTGTGTTGAGAAACTCAAGTTGATTGGTGAAGAACTTGAACTTTATGCTCATAACTTGGGAATTAACCTGGAGTTCTCTGTGGTGGGAAAGAACTTAGAAAATCTGCATACTGATGACATTACAGTGAATGACGAAGAGGTTCTGGTGGTTAATAGCATTCTTCAGTTGCACTGTGTAGTGAAAGAGAGTCGTGGGGCTTTAAACTCAGTCCTTCAGACCATTCATAAACTCTCACCAAAAGTTTTGGTTATGGTTGAGCAGGACTCAAGCCATAATGGACCCTTTTTCCTTGGGAGGTTCATGGAAGCACTTCATTATTACTCTGCCATTTTTGACTCTTTGGATGCCATGTTACCTAAGTATGACACTAAGAGAGCAAAAATAGAACAGTTCTATTTTGCAGAAGAGATAAAGAATATTATCAGCTGCGAAGGACCGGCAAGGATGGAGAGGCATGAGAGGGTGGACCAGTGGCGCCGGAGGATGAGTAGGGCCGGGTTTCAGAGTGCGCCAATGAAGATGGTGAGTCAGGCCAAGCAGTGGCTTCAGAAGAATCAGGTTTGTGATGGTTATACTGTTGTGGAGGAGAAAGGTTGTTTGGTCCTTGGGTGGAAATCAAAGCCGATTGTGGCAGCTTCTTGCTGGAAATGCGGAATCTAA 1590 0.4371 MIPLYRALKRDLSDNNDHSPMIGHGFHNSSVGCVTYPHLLPVFETRTSPPPWTLPFSDETKGNNNKRLKKDPSIPEVTGDYRSFSSSSGSEDCYSSLSRSNSVNSLPKLHFRDHIWTITQRYLASEEAAQKDMINPEVSEAEEQDDRYCADGMRLVQLLVHCAEGVACRDKSHSSILLSELRSNALVFGSPFQRVASCFAQGLSDRLAMVQPVGAVGNMEPLTNIMDIASEEMEEAFKLVYEICPHIKFGHFVANSTILEAFENHSFVHVVDLGMTLGLPHGHQWRGLIKSLAKRPGQLVRRLRITGVGLCVEKLKLIGEELELYAHNLGINLEFSVVGKNLENLHTDDITVNDEEVLVVNSILQLHCVVKESRGALNSVLQTIHKLSPKVLVMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIISCEGPARMERHERVDQWRRRMSRAGFQSAPMKMVSQAKQWLQKNQVCDGYTVVEEKGCLVLGWKSKPIVAASCWKCGI 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00083 529 Pfam GRAS domain family 155 526 IPR005202 -
Pral4782g00083 529 ProSiteProfiles GRAS family profile. 146 526 IPR005202 -
Pral4782g00083 529 MobiDBLite consensus disorder prediction 50 88 - -
Pral4782g00083 529 MobiDBLite consensus disorder prediction 62 76 - -
Pral4782g00083 529 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 125 521 IPR005202 -
Pral4782g00083 529 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00083 Pral-Chr4782 653623 655212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00083 152 527 GRAS Transcription Factor Family AT1G66350 34.908 2.59e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4782g00083 GRAS 5.9e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00083 - - pop:7463101 699.123