Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00068 ATGGCTTCAGGCGAGGGATTTCTGACAGATGAGCAGAGGGAAATGCTAAAAATTGCCAACAATAATGTGGAAAATTTATCGTCATCCCCGAAATCTCCCACATCCTTTGTTGCTGACCATCATATAAAAGCTCCTGCTGGTAGTAAGGCCCAAACTGCTGGGATTGCTGTGAGGCATGTGCGGCGATCACACTCTGGAAAGCTTGTGCGGGTGAAGAAGGATGGTGCCGGTGGTAAGGGCACTTGGGGAAAACTGCTTGATACTGACGGTGAATCTCGTATAGACAGGAAGGACCCAAATTATGATAGTGGTGAGGAACCCTATCAGCTGGTCGGGTCTACTGTCACTGACCCCTTAGATGAATTCAAGAAGGCAGTTGTTTCCACCATCGAGGAATATTTCAGCACGGGTGATGTGGAATTAGCTGCCTCTGATCTCAGAGAACTTGGTTCTAGTGAATATTATCCATACTTTATCAAGCGCCTTGTGTCTATGGCCATGGACAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTTTGCTTTCAGCATTGTATGCTGATGTGATTAGTCCTGCACAGATTAGGGATGGATTTTTTATGCTTCTTGAATCTGCTGATGATCTTGCGGTTGACATACTGGATGCTGTTGACATCCTTGCTTTGTTTCTGGCTCGGGCCGTTGTTGATGATATCCTTCCTCCAGCCTTTCTTGCCAGGGCAAGAAAAGCACTTCCTGAGCAATCCAAGGGGTTTCAGGTTATCCAGACTGCAGAGAAGAGTTATCTCTCAGCTCCGCATCATGCAGAGCTTGTAGAGAGGCGATGGGGTGGTAGCACTCACATCACTGTTGAAGAAGTAAAGAAGAAGATTTCTGATTTATTAAGAGAATATGTTGAGAGTGGTGACACAGTTGAAGCCTGCAGGTGCATAAGGGAGTTGGGGGTTTCATTCTTTCATCATGAGGTTGTGAAGAAGGCTCTGGTACTTGCCATGGAGATCCGTTCAGCGGAATCTTTAATGTTGAAGTTATTAAAAGAAGCAGCAGAAGAAGGCCTCATTAGTTCCAGTCAAATGGTGAAAGGTTTTTCTCGTTTGGCGGAAGGCCTAGATGATCTTGCTCTTGATATTCCGTCAGCCAAAACTTTGTTTCAGTCATTGGTACCCAGAGCGATATCTGAAGGATGGCTTGATGCTTCATTTTTTAAGCCCTCTGGTGAAGATGGGGATATCCCAGTTGAAGATGAAAAAGTTAGGGACTACAAAAAAGAGGCAGTAACTATAATTCATGAGTATTTTCTCTCTGATGATATTCCTGAACTCATTCGGAGTCTTGAAGATCTTGGAGCACCCGAGTTTAACCCAATATTTTTAAAGAAACTAATTACTCTCGCTATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTCCATATAGAGATATTCTCCACAGAGGATATAGTTAATGGTTTTGTCATGCTCCTGGAAAGCGCTGAAGATACTGCACTGGATATATTGGATGCTTCAAATGAACTCGCCCTGTTTTTAGCTCGGGCTGTGATTGATGATGTATTGGCCCCTCTCAATTTAGAAGAAATTGGCAGCAGGTTGCCGCCTAAATGCAGTGGCAGTGAAACCGTGCGTATGGCTCGATCACTCATTGCAGCTCGTCATGCCGGTGAGAGGCTATTGAGATGTTGGGGTGGGGGTACAGGATGGGCTGTGGAGGATGCTAAGGACAAGATCATGAAGCTATTGGAGGAGTATGAAAGTGGGGGTGTGGTCAGTGAAGCATGCCAGTGTATTCGTGATCTTGGAATGCCTTTCTTTAACCATGAGGTGGTGAAGAAAGCTTTGGTCATGGCTATGGAGAAGAAGAATGACAGGATGCTGGATCTGCTGCAGGAGTGCTTCAGTGAAGGTCTGATCACTATCAATCAGATGACTAAAGGCTTCACTCGCATCAAGGATGGTCTTGACGATCTGGCTCTTGACATTCCGAATGCTCGTGAGAAATTCGCCTTCTACGTGGAGCACGCCACAAGCAAGGGCTGGCTTTTACCTTCATTTGATTCTCCAGATGCCTGA 2103 0.4522 MASGEGFLTDEQREMLKIANNNVENLSSSPKSPTSFVADHHIKAPAGSKAQTAGIAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDGESRIDRKDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSTIEEYFSTGDVELAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLESADDLAVDILDAVDILALFLARAVVDDILPPAFLARARKALPEQSKGFQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKISDLLREYVESGDTVEACRCIRELGVSFFHHEVVKKALVLAMEIRSAESLMLKLLKEAAEEGLISSSQMVKGFSRLAEGLDDLALDIPSAKTLFQSLVPRAISEGWLDASFFKPSGEDGDIPVEDEKVRDYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAREKFAFYVEHATSKGWLLPSFDSPDA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00068 700 ProSiteProfiles MI domain profile. 582 700 IPR003891 -
Pral4782g00068 700 FunFam programmed cell death protein 4 409 563 - -
Pral4782g00068 700 SUPERFAMILY ARM repeat 579 695 IPR016024 -
Pral4782g00068 700 Pfam MA3 domain 122 233 IPR003891 -
Pral4782g00068 700 Pfam MA3 domain 286 397 IPR003891 -
Pral4782g00068 700 Pfam MA3 domain 584 691 IPR003891 -
Pral4782g00068 700 Pfam MA3 domain 421 530 IPR003891 -
Pral4782g00068 700 Gene3D - 114 262 - -
Pral4782g00068 700 Gene3D - 412 563 - -
Pral4782g00068 700 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Pral4782g00068 700 MobiDBLite consensus disorder prediction 87 103 - -
Pral4782g00068 700 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Pral4782g00068 700 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Pral4782g00068 700 PANTHER PROGRAMMED CELL DEATH 4 3 696 IPR039778 GO:0045892
Pral4782g00068 700 SMART ma3_7 286 397 IPR003891 -
Pral4782g00068 700 SMART ma3_7 122 233 IPR003891 -
Pral4782g00068 700 SMART ma3_7 583 692 IPR003891 -
Pral4782g00068 700 SMART ma3_7 420 531 IPR003891 -
Pral4782g00068 700 MobiDBLite consensus disorder prediction 87 106 - -
Pral4782g00068 700 FunFam programmed cell death protein 4 113 264 - -
Pral4782g00068 700 SUPERFAMILY ARM repeat 282 402 IPR016024 -
Pral4782g00068 700 Gene3D - 272 403 - -
Pral4782g00068 700 Gene3D - 570 697 - -
Pral4782g00068 700 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Pral4782g00068 700 FunFam Programmed cell death protein 4 271 406 - -
Pral4782g00068 700 SUPERFAMILY ARM repeat 417 575 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00068 Pral-Chr4782 529193 533614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00068 586 682 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 4.41e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00068 - - gmx:100809081 1236.48