Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral4782g00052 | ATGCATGATTTGCGCATGATCCATACAGACTTGAAGCCAGAAAACATACTGCTAGTTTCATCAGACTATGTTAAAGTTCCTGACTACAGGAGCTCTTGCAGATCACCAAGTTCATATTTCAAGAGAGTGCCAAAGTCAAGTGCTATCAAAGTTATTGATTTTGGTAGCACCACGTATGAGCGAGAGGATCAGACTTACATTGTATCAACACGGCATTATAGGGCACCCGAAGTTATACTTGGACTTGGATGGAGTTATCCGTGTGATATATGGAGTGTGGGATGCATATTGATAGAGCTATGCACGGGCGAAGCTTTGTTTCAAACTCATGAGAATTTGGAGCACCTTGCAATGATGGAAAGGGTTCTTGGTCCGTTGCCCCAGCACATGTTGAAAAGAGTAGACCGACATGCTGAGAAGTATGTTCGAAGGGGTAGACTTGATTGGCCAGAGGGGGCCACTTCTAGGGATAGTATCAAAGCTGTAATGAAGTTGCCTCGGCTTCAGAATCTGGTAATGCAGCATGTGGACCATTCAGCAGGAGATCTCATACATGTGTTGCAGGGTTTACTTAGATATGACCCTTCTGAAAGACTAACAGCTAGGGAGGCTCTAAGACATCCCTTCTTTACAAGAGATCACCTTAGGAGATAG | 654 | 0.4419 | MHDLRMIHTDLKPENILLVSSDYVKVPDYRSSCRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILIELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGATSRDSIKAVMKLPRLQNLVMQHVDHSAGDLIHVLQGLLRYDPSERLTAREALRHPFFTRDHLRR | 217 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral4782g00052 | 217 | PANTHER | SERINE/THREONINE-PROTEIN KINASE DOA-RELATED | 1 | 213 | - | - | |
| Pral4782g00052 | 217 | SMART | serkin_6 | 1 | 210 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pral4782g00052 | 217 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 210 | - | - | |
| Pral4782g00052 | 217 | ProSiteProfiles | Protein kinase domain profile. | 1 | 210 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pral4782g00052 | 217 | Pfam | Protein kinase domain | 1 | 210 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pral4782g00052 | 217 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 6 | 18 | IPR008271 | GO:0004672|GO:0006468 | |
| Pral4782g00052 | 217 | FunFam | Serine/threonine-protein kinase AFC2 | 1 | 210 | - | - | |
| Pral4782g00052 | 217 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 214 | IPR011009 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral4782g00052 | Pral-Chr4782 | 419539 | 421321 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral4782g00052 | 1 | 214 | MAP Kinase Gene Family | AT4G11330 | 30.594 | 5.41e-20 | 85.1 |
Transcription factors information