Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00052 ATGCATGATTTGCGCATGATCCATACAGACTTGAAGCCAGAAAACATACTGCTAGTTTCATCAGACTATGTTAAAGTTCCTGACTACAGGAGCTCTTGCAGATCACCAAGTTCATATTTCAAGAGAGTGCCAAAGTCAAGTGCTATCAAAGTTATTGATTTTGGTAGCACCACGTATGAGCGAGAGGATCAGACTTACATTGTATCAACACGGCATTATAGGGCACCCGAAGTTATACTTGGACTTGGATGGAGTTATCCGTGTGATATATGGAGTGTGGGATGCATATTGATAGAGCTATGCACGGGCGAAGCTTTGTTTCAAACTCATGAGAATTTGGAGCACCTTGCAATGATGGAAAGGGTTCTTGGTCCGTTGCCCCAGCACATGTTGAAAAGAGTAGACCGACATGCTGAGAAGTATGTTCGAAGGGGTAGACTTGATTGGCCAGAGGGGGCCACTTCTAGGGATAGTATCAAAGCTGTAATGAAGTTGCCTCGGCTTCAGAATCTGGTAATGCAGCATGTGGACCATTCAGCAGGAGATCTCATACATGTGTTGCAGGGTTTACTTAGATATGACCCTTCTGAAAGACTAACAGCTAGGGAGGCTCTAAGACATCCCTTCTTTACAAGAGATCACCTTAGGAGATAG 654 0.4419 MHDLRMIHTDLKPENILLVSSDYVKVPDYRSSCRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILIELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGATSRDSIKAVMKLPRLQNLVMQHVDHSAGDLIHVLQGLLRYDPSERLTAREALRHPFFTRDHLRR 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00052 217 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 213 - -
Pral4782g00052 217 SMART serkin_6 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00052 217 Gene3D Transferase(Phosphotransferase) domain 1 1 210 - -
Pral4782g00052 217 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00052 217 Pfam Protein kinase domain 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00052 217 ProSitePatterns Serine/Threonine protein kinases active-site signature. 6 18 IPR008271 GO:0004672|GO:0006468
Pral4782g00052 217 FunFam Serine/threonine-protein kinase AFC2 1 210 - -
Pral4782g00052 217 SUPERFAMILY Protein kinase-like (PK-like) 1 214 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00052 Pral-Chr4782 419539 421321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00052 1 214 MAP Kinase Gene Family AT4G11330 30.594 5.41e-20 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pral4782g00052 Pkinase 1.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00052 K08287 - rcu:8278267 420.239