Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00050 ATGGGGGAAGGAACTTTTGGGCAAGTCTTGGAATGCTGGGACCGAGAACGGAAGGAGATGGTTGCAATAAAAATTGTTCGGGGGATAAAAAAATATAGGGAGGCTGCCATGATAGAGATTGAGGTGCTGCAACAACTTGCTAAACATGATAAAGGTGGCAACCGTTGTGTACAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGGCCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTTCGCGAGATTGGCAGACAACTGTTGGAATGTATAGCATTCATGCATGATTTGCGCATGATCCATACAGACTTGAAGCCAGAAAACATACTGCTAGTTTCATCAGACTATGTTAAAGTTCCTGACTACAGGAGCTCTTGCAGATCACCAAGTTCATATTTCAAGAGAGTGCCAAAGTCAAGTGCTATCAAAGTTATTGATTTTGGTAGCACCACGTATGAGCGAGAGGATCAGACTTACATTGTATCAACACGGCATTATAGGGCACCCGAAGTTATACTTGGACTTGGATGGAGTTATCCGTGTGATATATGGAGTGTGGGATGCATATTGATAGAGCTATGCACGGGCGAAGCTTTGTTTCAAACTCATGAGAATTTGGAGCACCTTGCAATGATGGAAAGGGTTCTTGGTCCGTTGCCCCAGCACATGTTGAAAAGAGTAGACCGACATGCTGAGAAGTATGTTCGAAGGGGTAGACTTGATTGGCCAGAGGGGGCCACTTCTAGGGATAGTATCAAAGCTGTAATGAAGTTGCCTCGGCTTCAGAATCTGGTAATGCAGCATGTGGACCATTCAGCAGGAGATCTCATACATGTGTTGCAGGGTTTACTTAGATATGACCCTTCTGAAAGACTAACAGCTAGGGAGGCTCTAAGACATCCCTTCTTTACAAGAGATCACCTTAGGAGATAG 984 0.4339 MGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLRMIHTDLKPENILLVSSDYVKVPDYRSSCRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILIELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHAEKYVRRGRLDWPEGATSRDSIKAVMKLPRLQNLVMQHVDHSAGDLIHVLQGLLRYDPSERLTAREALRHPFFTRDHLRR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00050 327 Pfam Protein kinase domain 1 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00050 327 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
Pral4782g00050 327 CDD PKc_CLK 1 320 - -
Pral4782g00050 327 Gene3D Transferase(Phosphotransferase) domain 1 49 320 - -
Pral4782g00050 327 SMART serkin_6 2 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00050 327 FunFam Serine/threonine-protein kinase AFC2 71 320 - -
Pral4782g00050 327 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 323 - -
Pral4782g00050 327 ProSiteProfiles Protein kinase domain profile. 1 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00050 327 Gene3D Phosphorylase Kinase; domain 1 1 75 - -
Pral4782g00050 327 SUPERFAMILY Protein kinase-like (PK-like) 2 324 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00050 Pral-Chr4782 419539 423135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00050 1 320 Core Cell Cycle Gene Families AT1G76540 26.048 4.02e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pral4782g00050 Pkinase 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00050 K08287 - rcu:8278267 643.269