Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00042 ATGGCTCTACTTTCAACTGTCAGGCACTACTTTCCCTTGGAGCTAAGCTCCCTGCTCTTAGCACTTTCATGCTTCATCGTCACCGTCCTGTTTTTGTTCACTCTCAGAACTAGAACAAGTAAATCCAAGTTGAATCTGAATCGGATTCCGTCGCCACCAAAACTACCCATAATCGGAAATCTTCATCAGATGGGCTCCCTTCCACACCGTTCTTTTCGAACTCTCTCCGAAAAATATGGACCTATTATGTTTTTACAGTTGGGTCAGATTCCAACTGTGGTGGTTTCTTCCGCAGAATTGGCCTCCGAAATTATGAAAACCCATGACCTTGCCTTCGCTGATCGACCTCAGGGTATTGGTCCTACGCTCTTACTCTATGGATGTAATGACATTGGCTTTGGGAACTACGATGAAAAGTGGAGACAGAAGAAGAAAATCTGTGTCAATGAATTTCTTAGCCTGAGAAGGGTTCAATCCTTCAAGAACGTCAGAGAAGAAGAAGCTCGGGAGTTAGTGAATAAGATCCGTGCTTTGTGCTCGACAGGTGCGGGTTCTGTGAATTTGACTGACTTGCTTATTGCTTCATCAAATAATATCGTGTCTAAGTGTGCTCTTGGGGATCAGTTTAACACTGAGGCAAATACGAGGATCGGAGAGCTAGCGAGAAAGGTGATGATCAACCTTTTGGCTTTCAGTGTGGGAGATTATTTCCCTTCATTTCGATGGGTTGATGTTCTCACTGGTCTGGTACCGAGGTTAAAGGCCATCTTTAGAGAGTTAGATGATTTCTTTGAAAGCGTCATTGAAGAACACAGGAGCATGATGAAGAAGACAAGGGATGACCAATTCTCCATGAGGAAAAACTTGCTCGATATTCTCCTTCAACTCCTAGACGACGGCATGCTGGGCGATAGTTTCTCCCAAAACGATCTCAAATCCATCCTAATGGATATGTTTGTGGGAGGAAGCGACTCAAGTTCAGCAACAATGGAGTGGGCCATGGCGGAGCTGGTGATGAATCCCACGAAAATGCAGAAAGCCCAGGAAGAGGTAAGACGCGTAGTGGGGAACAATTCAAAGATCGAAGACGAAGACATAAATCAAATGAATTACTTGAAATGTGTGGCGAAAGAAATTCTGAGATTGCATCCAGCAGCGACTCTCATTCCTCCTCGATTATCCAGATCAAGTGTGAATCTCGGAGGGTACAATATTCCAGCTAAAACAACGCTGTACATAAACGCATGGGCAATTCAAAGAGATTCTGATTTCTGGGAAAGACCTGAAGAGTTCATTCCTGAGAGATTTGAGCAGAACGATGTTGAATTCAAAGGGAAAAACTTCCATTTCATACCGTTTGGTTCAGGAAGAAGAGGATGTCCTGGAATGATATTTGGGGTTGCTGCTGTGGAATCCATGCTCGCTAATCTCTTGTACTGGTTTGACTGGAAGCTGCCTACTGTAAATGGCGTCACTGTTCAACACATGGATATGGAGGAGACGTTCGGGCTAGTTGTGAGTAAAAAAGTACCTCTGTATCTTCAACCAATACCCCACTATTAA 1563 0.4402 MALLSTVRHYFPLELSSLLLALSCFIVTVLFLFTLRTRTSKSKLNLNRIPSPPKLPIIGNLHQMGSLPHRSFRTLSEKYGPIMFLQLGQIPTVVVSSAELASEIMKTHDLAFADRPQGIGPTLLLYGCNDIGFGNYDEKWRQKKKICVNEFLSLRRVQSFKNVREEEARELVNKIRALCSTGAGSVNLTDLLIASSNNIVSKCALGDQFNTEANTRIGELARKVMINLLAFSVGDYFPSFRWVDVLTGLVPRLKAIFRELDDFFESVIEEHRSMMKKTRDDQFSMRKNLLDILLQLLDDGMLGDSFSQNDLKSILMDMFVGGSDSSSATMEWAMAELVMNPTKMQKAQEEVRRVVGNNSKIEDEDINQMNYLKCVAKEILRLHPAATLIPPRLSRSSVNLGGYNIPAKTTLYINAWAIQRDSDFWERPEEFIPERFEQNDVEFKGKNFHFIPFGSGRRGCPGMIFGVAAVESMLANLLYWFDWKLPTVNGVTVQHMDMEETFGLVVSKKVPLYLQPIPHY 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00042 520 Gene3D Cytochrome P450 33 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 Pfam Cytochrome P450 50 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PANTHER CYTOCHROME P450 71B11-RELATED 30 517 - -
Pral4782g00042 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Pral4782g00042 520 CDD CYP71-like 78 512 - -
Pral4782g00042 520 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00042 520 FunFam Cytochrome P450 83B1 34 515 - -
Pral4782g00042 520 Coils Coil 344 364 - -
Pral4782g00042 520 SUPERFAMILY Cytochrome P450 49 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00042 Pral-Chr4782 348353 350296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00042 19 516 Cytochrome P450 AT3G26310 41.153 2.99e-133 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00042 K20617 - jre:108986000 562.377