Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00040 ATGGCTTTTCTGAATGCCACTTTTAACTTGTATCTCCTAGGCTTCGTCGCCTTCTTGTTCGTGTTAATTAAACTTACAAGACCAACAAAAAAGAAACCCAATCTGCCTCCATCTCCACCGAAATTGCCAATTATCGGCCATATTCATCAGTTAGGCACTCTTCCTTATCGTTCTTTCAGAGACCTCTCTCTGAAACACGGTCCTCTCTTGTGGTTACAGCTCGGTCGGATTCCTGCTTTACTGGTCTCTTCTGCAGATTTGGCCAGAGAACTGATGAAGAACCAAGACGCAGTTTTTGCCAGCAGGTTTCAAAGCATATCTGCCAGAACCTTACTCTATGGATGTAAAGATATCGCCTATGCCACCTATGGCGAAAGCTGGAGACAGAAAAGGAAGATTTGCGTGCTTGAACTGCTGAGCCTGAAAAGGGTTCGATCTTTCCAGTTCATAAGAGAAGAAGAAGTTGCAGAAATGGTGAAGGAGATACGAAGAGCTTCTTCGAGTGATACTAATTGCTCTGTGAACATAAGTGACCTCATATCTGCCACCACCAACAACATAATATGCAGATGCATAATTGGACAGAAGTATGATATATCAGAGAGCAGTGGGAGATTTGGGACGCTTGCGAGGAAGGAGATGATTCATCTTGCAGAGTTGGTAGTGGGAGATTTCTTTCCTTGGTTGGGTTGGGTTGATGTTCTCACTGGGAAAATTCATGAGCTTAAAGACACGTTTAAAGCCATGGATGGGTTCTTTGATGAGGTGACTGAGGATCATAAGAAGGTGATAAAGAAGGACGATGAAAAGAAAGACTTTGTGGATATTCTTCTTCAACTTCAACGGAGCGATAAGCTTGAATTCGAGCCCGCCCAAAATGACCTCAAAGCCATCCTAACGGACATGTTTTTAGGAGGGAACGAGACTACATCAACGACGCTGGAGTGGATTTTAGCAGAGCTGTGGAGAAATCCAAGAATCATGAAGAAGGCGCAACAAGAGGTGAGAAAAGTGGTGGGTTCCAAATCAAAAGTGGACGAAAGTGACGTGAACGAAATGAAGTACTTGAAACTTGTCATCAAAGAAGCTCTGAGATTACACCCATCGGCTCCTTTCTTGGTCCCTCGACAAACAGTCTGTGATGCAAAACTAGGAGGCTATGATATTCCTTCCAAAACACTGATATTTGTGAACATATGGGCAATCCAAAGGGACCCAGAAATATGGGAAAATCCTGAAGATTTCATCCCAGAGAGATTTGAGAAGAATCAGATGGATTTCAAAGGACAAGACTTTGAATTCATCCCATTTGGTTCTGGGAAAAGGATATGTCCTGGTATGGCATTCGGACTTGCTTCAGTTGAGTACATGCTGGCCAATCTTCTTCACTGGTTTGATTGGAATCTGCCTCAAGATGGTTCACCCGTGTGTGACATTGATATGAGTGAGACGTATGGGCTCACAGTGAAGAAGAAAGTCCCTATTTTTCTTCAACCTATACCAGACTGGCTCCAATCTCAATCTGCTTAA 1530 0.4333 MAFLNATFNLYLLGFVAFLFVLIKLTRPTKKKPNLPPSPPKLPIIGHIHQLGTLPYRSFRDLSLKHGPLLWLQLGRIPALLVSSADLARELMKNQDAVFASRFQSISARTLLYGCKDIAYATYGESWRQKRKICVLELLSLKRVRSFQFIREEEVAEMVKEIRRASSSDTNCSVNISDLISATTNNIICRCIIGQKYDISESSGRFGTLARKEMIHLAELVVGDFFPWLGWVDVLTGKIHELKDTFKAMDGFFDEVTEDHKKVIKKDDEKKDFVDILLQLQRSDKLEFEPAQNDLKAILTDMFLGGNETTSTTLEWILAELWRNPRIMKKAQQEVRKVVGSKSKVDESDVNEMKYLKLVIKEALRLHPSAPFLVPRQTVCDAKLGGYDIPSKTLIFVNIWAIQRDPEIWENPEDFIPERFEKNQMDFKGQDFEFIPFGSGKRICPGMAFGLASVEYMLANLLHWFDWNLPQDGSPVCDIDMSETYGLTVKKKVPIFLQPIPDWLQSQSA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00040 509 Pfam Cytochrome P450 36 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 CDD CYP71-like 65 494 - -
Pral4782g00040 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Pral4782g00040 509 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 Gene3D Cytochrome P450 21 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 PANTHER CYTOCHROME P450 71B11-RELATED 20 500 - -
Pral4782g00040 509 SUPERFAMILY Cytochrome P450 36 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00040 509 FunFam Cytochrome P450 83B1 22 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00040 Pral-Chr4782 309030 310988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00040 15 500 Cytochrome P450 AT5G25140 43.381 1.40e-141 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00040 K20617 K00495 cave:132171514 581.637