Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00039 ATGGCTTTTCAACCATTTCTTAAGCCACATTTTTCCGATGAAGCAAATCAAAGCCTCTACTTGTCTCTCTGCTGCTTCATCACCCTTGTGTTAGCTTTCAAGCTATCAAGAGGAAAGCAATACTCCAATCTGCCTCCATCTCCTCCAAAACTTCCTATTATAGGCCATCTTCATCAGCTGGGTCCTCTTCTCCGCCGATCCTTCCGTGACCTCTCTAATAAATACGGCCCTCTCCTTCTGCTGCAAGTGGGTCAAATTCCAACCCTGCTCGTGTCTTCTGCCGATTCAGCCAAACAAGTCCTGAAAACCCGCGACATAGATTTCGCAAACAGAGTTCAAGGCGCAGCTGCCAGAATTATATTCAATGGATGCAAGGACATATTCGCCTCAGACTACGGTGAAAACTGGAGACAGAAGAGGAAACTGTGCGTGCTTCAACTCTTGAGCTTGGAGATGGTTCGATCATTTCAGTTCATAAGGGATGATGAAATCCAAGATTTGATCAGTAACATAAGAGAAACCTACTGGAGAAGCAATGGAAGTTGCGGCGTGAACATGAGTGAGATGCTAAGTGCAGATTCTAACAACATAACTTGCAGGTGTATCATCGGACACAAGTTTGAAACAAAAGAGAGCAGTAGGTTCTGGAATTTGGCTAGGAGGGAGATTATTCGTCTTGGGGATATAAGTTTGGGAGACGTGTTTCCTTCGTTGAGTTGGGTTGATTATGTGACAGGGAAAGTGAGGGAGTTTAAGAGAAGATTCGCAGAACTGGATCGTTTCTCCGATGAGGTGATCGCAGAGCACAAGGCAGGGAAGAAGGATGATGATGAGAAGAAAGACTTCGTCGATATTCTTCTCCAAACTGGTCATCAACTTCACTTTGAGCTGGATCAGGATAGCTTCAAAGCTATCCTAATGGACATGTTCTCAGCAGGAAACGACACAACTTCAACAACTATGGAGTGGGCAATGTCGGAACTGAGGAGTCATCCAAGTATCATGGAAAAAGTGCAGAAAGAAATAAGGACAGTGGTGGGCAGCAAATCAAAAATAGAGGAATCTGATATTAACAAAATGCAATTCTTGAAATGTGTCATCAAAGAAACCCTAAGATTACACCCACCCCTTCCCTTATTGATCCCTCGTAGAACAAAGAAACGTGAAGAAGTAGGAGGCTATGATGTTCCTCCCAAGACAATGGTGTTTGTGAATGCGTGGGCAATTCAGAGGGACCCTCAAGTCTGGGAAAGGCCTGAAGAGTTCGTTCCAGAGAGATTTGAACAGAGGGAGATTGATTTCAAAGGACAAGACTTTGAGTATATCCCATTTGGTTCAGGAAGAAGGATATGTCCAGGGATGGCCTTTGGGCTTGCTTCCATTGATTACCAACTCGCTAATCTTCTTTATTGGTTTGACTGGTGGCTGCCTTCTTCTGCGTGTGATGTAGATATGGGCGAGACATTTGGGCTCGTCGTCAAAAAGACAATGCCACTTTATCTTCAACCCAAACCCTACTTGCTTCCGATGCAGTCATATGTTGCGGTTTCTGTTTGTTCTTGTGATATGATGTGCGAAAACCTAAATAATTAA 1593 0.4401 MAFQPFLKPHFSDEANQSLYLSLCCFITLVLAFKLSRGKQYSNLPPSPPKLPIIGHLHQLGPLLRRSFRDLSNKYGPLLLLQVGQIPTLLVSSADSAKQVLKTRDIDFANRVQGAAARIIFNGCKDIFASDYGENWRQKRKLCVLQLLSLEMVRSFQFIRDDEIQDLISNIRETYWRSNGSCGVNMSEMLSADSNNITCRCIIGHKFETKESSRFWNLARREIIRLGDISLGDVFPSLSWVDYVTGKVREFKRRFAELDRFSDEVIAEHKAGKKDDDEKKDFVDILLQTGHQLHFELDQDSFKAILMDMFSAGNDTTSTTMEWAMSELRSHPSIMEKVQKEIRTVVGSKSKIEESDINKMQFLKCVIKETLRLHPPLPLLIPRRTKKREEVGGYDVPPKTMVFVNAWAIQRDPQVWERPEEFVPERFEQREIDFKGQDFEYIPFGSGRRICPGMAFGLASIDYQLANLLYWFDWWLPSSACDVDMGETFGLVVKKTMPLYLQPKPYLLPMQSYVAVSVCSCDMMCENLNN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00039 530 CDD CYP71-like 74 499 - -
Pral4782g00039 530 SUPERFAMILY Cytochrome P450 45 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PANTHER CYTOCHROME P450 71B11-RELATED 30 504 - -
Pral4782g00039 530 Gene3D Cytochrome P450 31 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 FunFam Cytochrome P450 83B1 32 502 - -
Pral4782g00039 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Pral4782g00039 530 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4782g00039 530 Pfam Cytochrome P450 45 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00039 Pral-Chr4782 280643 282508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00039 34 500 Cytochrome P450 AT3G48310 41.525 1.13e-130 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00039 K20617 - qsa:O6P43_022640 524.628