Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00028 ATGTACAAGGAGGTTTTGGGGCAGGGGGCTTTCAAGAAGGTATACAGAGCATTTGATGAGTTGGAAGGAATTGAAGTGGCTTGGAATCAGGTTAAGGTGGCAGATCTGTTGCGTAACAATGAAGATTTGGAGCGCCTATATTCAGAAGTGCATTTGCTGAAGACGTTGAAGCACAAGAATATAATCAAGTTTTACAATTCATGGGTTGATACAAAGAATGAGAACATCAATTTCATCACTGAAATTTTCACTTCTGGAACCTTACGCCAATATCGGCAGAAACATAAGCATGTTGACTTGAGAGCGTTGAAGAAATGGTCTAGACAGATTTTGGAGGGCCTTTCTTATCTTCACAGTCATGATCCACCAGTTATTCATCGAGATTTAAAGTGTGACAATATTTTTGTCAATGGAAATCATGGTGAGGTTAAAATTGGTGACTTGGGATTGGCTGCCATACTTCAACAAGCCAATTCAGCTCACAGTGTTATAGGTACTCCGGAGTTTATGGCTCCTGAACTTTATGAAGAGGAATACAATGAACTTGTTGACATCTATGCTTTTGGCATGTGTTTGCTGGAGTTGGTGACTGTCGAGTATCCATATGTTGAATGTGCTAATGCTGCTCAAATATATAAGAAAGTGATATCTGGAATCAAGCCGGCATCATTGGCAAAAGTGAAAGACCCTCAAGTTAAAGCATTTATAGAAAAGTGTATTGCAAATGTTTCGGAGCGGTTGCCTGCAAAGGAACTCTTAATGGATTCCTTTCTTCTTCCAGATGATGAAAGTGACAGTGTAGGTCGTTCTTTAAAGTCCAGAGCCCATGATTTAGGACATAGTGATCAACATGTTATTGGTAAACATCTCGAAGAAACTTCTGCTGAGATAGGTAGGGAATTCAGAGTAGAAGGTCAAAGAAGAGATGTCAATACTATATTTTTAAAGCTGAGAATAGCTGACTCCTCAGGTCATATTCGCAACATCCACTTCCCTTTTGATGTTGAAGCAGACACTGCGATTGCCGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTCACGGATCAAGATGTTACAAATATTGCTGAGATGATTGACACGGAAATTCGCTATCTCATTCCAGACTGGAATCCTAATGAAACTCCTACTGCTGATAGCACTGGTCAGGAATTAGCAGTTCCAGGTGGCCATGCCTCTGAAACTAAGGATGAGGCTTCTCCACATGGAAATAATTCTATAGCTTCTACTGGTGGTCTTTCATTTGAACGATTACGTTCAGGTCGTAACTACTGGTCTGACTCACCTAAGACAGGTAGAAACTCTCCACTGGGGCCTGGTGCTTCAAAATTGTCTAGCCAAGCGGATTCAAACACTGCAGGAACCTCAACTGCATATGCAGGGACTTCAACCGAGCAGCAGGATGGCAACTGCAGTTGTGATGGTGATAATAGTGTAGAAAAGAAATCTAGTGGGACTACTGATTCCCATTCCAGTAAGAGAAGCATTGCATCTGGGGATTTACAGTTAACCGATGGAGAGTCTCCTTTGGTAGAAAAACCGATAGAATTGAAAGATGATGAATTAGAAAATGTCAACATAATTGCTGCAAAATTTGAACAATTATTGCTAAAGCAACGACAAGAATTTGATGAACTAAAGAGGAAGCATGAATTAGATGTCTTGGATTTTTTGAATGAACTTCCTATAGAAACTCAACGTAAGGTCTTAAATACATGCCATCAGGAATACAACAATGGAATTGTACGGTAA 1770 0.4028 MYKEVLGQGAFKKVYRAFDELEGIEVAWNQVKVADLLRNNEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRQKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVISGIKPASLAKVKDPQVKAFIEKCIANVSERLPAKELLMDSFLLPDDESDSVGRSLKSRAHDLGHSDQHVIGKHLEETSAEIGREFRVEGQRRDVNTIFLKLRIADSSGHIRNIHFPFDVEADTAIAVASEMVEELELTDQDVTNIAEMIDTEIRYLIPDWNPNETPTADSTGQELAVPGGHASETKDEASPHGNNSIASTGGLSFERLRSGRNYWSDSPKTGRNSPLGPGASKLSSQADSNTAGTSTAYAGTSTEQQDGNCSCDGDNSVEKKSSGTTDSHSSKRSIASGDLQLTDGESPLVEKPIELKDDELENVNIIAAKFEQLLLKQRQEFDELKRKHELDVLDFLNELPIETQRKVLNTCHQEYNNGIVR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00028 589 MobiDBLite consensus disorder prediction 376 513 - -
Pral4782g00028 589 Pfam Protein kinase domain 3 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00028 589 CDD STKc_WNK 2 258 - -
Pral4782g00028 589 SUPERFAMILY Protein kinase-like (PK-like) 3 277 IPR011009 -
Pral4782g00028 589 SMART serkin_6 2 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00028 589 FunFam Probable serine/threonine-protein kinase WNK1 1 81 - -
Pral4782g00028 589 MobiDBLite consensus disorder prediction 405 419 - -
Pral4782g00028 589 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 315 369 IPR024678 GO:0004674|GO:0005524
Pral4782g00028 589 FunFam probable serine/threonine-protein kinase WNK9 83 263 - -
Pral4782g00028 589 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 559 - -
Pral4782g00028 589 Gene3D - 311 405 - -
Pral4782g00028 589 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Pral4782g00028 589 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00028 589 Gene3D Transferase(Phosphotransferase) domain 1 83 262 - -
Pral4782g00028 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pral4782g00028 589 MobiDBLite consensus disorder prediction 430 486 - -
Pral4782g00028 589 FunFam Probable serine/threonine-protein kinase WNK3 311 406 - -
Pral4782g00028 589 Coils Coil 535 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00028 Pral-Chr4782 171529 175762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00028 76 452 MAP Kinase Kinase Kinase AT3G48260 62.827 6.24e-156 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral4782g00028 Pkinase 3.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00028 K08867 - qsa:O6P43_030822 746.888