Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00017 ATGGACTCCAAACACACTCCCACTCTTAAATTCCTCTGCAGCTACGGCGGCAGGATTCTTCCCCGTTCTACCGACGGGAACCTCCGTTACGTCGGCGGCCACACCAGAGTCCTCTCTGTTGATCCTTCCATATCCTTTTCAGACCTCATGGTAAAGCTTGTAGAGTTCTGTGGTTCGTCCGTAACCTTGAAGTGTTCATTGCCCAGCGGCGACCTCGAGACGTTGATTTCCATTACTAACGATGAGGATTTGGCCATTATTATCCAGGAATATAAGCGAGCCTCCTCGGCTAAGGCTCACCCGTTGAAGATCAGAGCCATTCTTTCGCCGCCCAGGTCTCTCAAGAAAGTATCTCCTGCTTCGTCTTCGCGATCGAGCGCCGAACTCTCTTCAACTGGATCGGCTCACTCCTCCAATGAATCGTTGCCGTATTCCCCTGTATATCGTGTTCTCCGTCCGGTCACGTATCCGGTAGGATTCCGTTACGGGTCGGGAAAAGCTTGCTGCTATTCCGGCCAAGTCGACAGAAGCTTTCGATTCTTAAACCGGAAACCTAGCTGCCCCAATTTCTGCCACTGA 579 0.5181 MDSKHTPTLKFLCSYGGRILPRSTDGNLRYVGGHTRVLSVDPSISFSDLMVKLVEFCGSSVTLKCSLPSGDLETLISITNDEDLAIIIQEYKRASSAKAHPLKIRAILSPPRSLKKVSPASSSRSSAELSSTGSAHSSNESLPYSPVYRVLRPVTYPVGFRYGSGKACCYSGQVDRSFRFLNRKPSCPNFCH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00017 192 Pfam PB1 domain 25 102 IPR000270 GO:0005515
Pral4782g00017 192 SUPERFAMILY CAD & PB1 domains 25 115 - -
Pral4782g00017 192 PANTHER OS05G0427100 PROTEIN-RELATED 7 126 - -
Pral4782g00017 192 MobiDBLite consensus disorder prediction 114 141 - -
Pral4782g00017 192 Gene3D - 29 108 - -
Pral4782g00017 192 SMART PB1_new 23 111 IPR000270 GO:0005515
Pral4782g00017 192 CDD PB1_UP2 12 108 - -
Pral4782g00017 192 MobiDBLite consensus disorder prediction 115 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00017 Pral-Chr4782 122068 123146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00017 9 110 MAP Kinase Kinase Kinase AT1G04700 47.059 1.66e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00017 - - qsa:O6P43_022662 224.557