Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4782g00016 ATGGGGACGATCTTCTTGCTTCTCTTCTTCCCCGTCCTCTTCTCTCCCATCTCTGCACTCGACTTTCTTTTCAATTCCTTCAACGGCATCGTCAATGGCACCAACCTTACTCTCATCAACGACGCTCGCGTCGACCACACCGTCATCCGCATGACCAACGACTCCAACCAGTACTCCTTCGGACGATCCTTCTACCCCACCGCCGTTTCCATGAAACCAAACTCCAATTCCTCCAATATTTCTTCCTTCTCCACTTCCTTCGTCTTCTCCATTTTGCCCCAGATCTCCACGAGCCCAGGTTTCGGTCTCGCCTTCGTCCTTACCAGTACCATGTCTCCCGTCGGTGCCCTAGCCAGCCAGTACTTCGGTCTCTTCACAAACGCCACACGGCCCGCCGTCACTCCACTGTTCGCCGTTGAATTTGACACTGGTCAGAACCCAGAGTTCAACGACCCAGATGATAACCACATCGGAATCGATCTGAACAACATTGAATCCGCCGTCACGAAATCCGCAGGCTACTATAATTCCACTGGTGGTTTCGTGCCTATTCGAATGCGTGATGGTCGTAACGTTCGAGCTTGGATAGATTTTGATGGCGCAAATTTGGAGATAAATGTCACGGTTGCGCCAATTGGCGTTACTCGCCCGTCTATGCCGACGCTTTCGTATAAAGACCCTGTTATAGCGAATTACGTGTCGGCAGAGATGTATGTTGGATTTTCTGCATCGAAAACGAATTGGGTTGAAGCACAGAGACTTTTAGCTTGGAGCTTCAGCGATACCGGACCTGCGAAAGACATCAATACGACAAATTTTCCAGTCTTCAAGCCACAATCGTCGCCTTCGAAGCTTTCAGGTGGGGCGATTGCGGGGATCGTCATTGGATGTGTTGCTTTTATGGTGATTTGTGGTTCTGGGTTTTACCTGTGGTGGCGAAACAAGAAATTGAAAGAGCAAGAGGACGAAATGGAAGATTGGGAGCTAGAGTACTGGCCCCACAGATTCTCATGCGAGGAGCTCAGCGTGGCTACTGATGAATTCCGCAAGGAAAATCTTTTGGGTTCAGGAGGATTCGGAAGAGTCTACAAAGGAACACTATCGAACAACACAGAAATCGCAGTCAAGTGCGTCAACCACGATTCCAAGCAGGGGTTACGAGAATTTATGGCGGAGATCTCCAGCATGGGCAGGCTTCAACACAAGAATTTGGTTCAAATGAGAGGATGGTGCAGAAAAGGGAACGAGCTCATGCTTGTTTACGACTATATGCCTAATGGAAGTCTGAACAAATGGATTTTCGACAAACCTGCCAAGCTTCTGGGCTGGGAACAACGTCGTCGAATCCTCGTCGACGTCGCCGAAGGGCTAAACTATCTACACCATGGTTGGGATCAAGTGGTGATACACAGAGACATTAAGTCGAGCAACATATTGCTGGATTCGGAAATGAGAGGCAGATTGGGGGACTTTGGTCTTGCTAAGCTTTACCAACAAGGTGAGGTTCCAAACACGACGAGAGTGGTAGGTACGTTGGGGTATTTGGCACCTGAGCTGGCGTCGGTGGCTGCGCCGACGGCGGCGAGCGATGTGTACAGCTTCGGCGTGGTGTTGTTGGAGGTTGCGTGTGGGCGGAGACCGATAGAGACGTCCGCGCCGGAGGAGGAGGTAGTGTTGATTGACTGGGTAAGGGACTTGTACGCGAACGGGAGTGTAGTCGACGCGGCGGATGCAAGGATTAAGGGTGAGTACGATCAGGGAGACATGGAGATGATTTTGAAGCTTGGTTTAGCTTGTTGTCACCCTGATCCGCAGAGAAGACCAACCATGAAGGAGGTTGTGTTGCTTTTGTTGGGCGAGGAACTCGGGGCGGCGCCGGTGGAATCGTTGTCTGAGTTAGCTCGCGGCGAGAGCGGCACCGTGAATAGTGACGGCGACAGGGAATCACAAGAGGCGGCGCTACAGGGGACCACGCATGCGGTTTAA 1986 0.5136 MGTIFLLLFFPVLFSPISALDFLFNSFNGIVNGTNLTLINDARVDHTVIRMTNDSNQYSFGRSFYPTAVSMKPNSNSSNISSFSTSFVFSILPQISTSPGFGLAFVLTSTMSPVGALASQYFGLFTNATRPAVTPLFAVEFDTGQNPEFNDPDDNHIGIDLNNIESAVTKSAGYYNSTGGFVPIRMRDGRNVRAWIDFDGANLEINVTVAPIGVTRPSMPTLSYKDPVIANYVSAEMYVGFSASKTNWVEAQRLLAWSFSDTGPAKDINTTNFPVFKPQSSPSKLSGGAIAGIVIGCVAFMVICGSGFYLWWRNKKLKEQEDEMEDWELEYWPHRFSCEELSVATDEFRKENLLGSGGFGRVYKGTLSNNTEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWIFDKPAKLLGWEQRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSEMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLAPELASVAAPTAASDVYSFGVVLLEVACGRRPIETSAPEEEVVLIDWVRDLYANGSVVDAADARIKGEYDQGDMEMILKLGLACCHPDPQRRPTMKEVVLLLLGEELGAAPVESLSELARGESGTVNSDGDRESQEAALQGTTHAV 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4782g00016 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 266 IPR013320 -
Pral4782g00016 661 SUPERFAMILY Protein kinase-like (PK-like) 324 617 IPR011009 -
Pral4782g00016 661 FunFam L-type lectin-domain containing receptor kinase S.4 18 267 - -
Pral4782g00016 661 Gene3D Transferase(Phosphotransferase) domain 1 424 623 - -
Pral4782g00016 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Pral4782g00016 661 MobiDBLite consensus disorder prediction 633 661 - -
Pral4782g00016 661 PANTHER - 49 620 - -
Pral4782g00016 661 FunFam L-type lectin-domain containing receptor kinase S.4 424 629 - -
Pral4782g00016 661 Gene3D Phosphorylase Kinase; domain 1 311 423 - -
Pral4782g00016 661 Gene3D - 18 275 - -
Pral4782g00016 661 Pfam Protein kinase domain 349 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00016 661 CDD STKc_IRAK 354 611 - -
Pral4782g00016 661 ProSiteProfiles Protein kinase domain profile. 348 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4782g00016 661 Pfam Legume lectin domain 20 272 IPR001220 GO:0030246
Pral4782g00016 661 CDD TM_EGFR-like 286 320 - -
Pral4782g00016 661 FunFam L-type lectin-domain containing receptor kinase S.1 333 423 - -
Pral4782g00016 661 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Pral4782g00016 661 MobiDBLite consensus disorder prediction 635 661 - -
Pral4782g00016 661 CDD lectin_legume_LecRK_Arcelin_ConA 20 263 IPR001220 GO:0030246
Pral4782g00016 661 SMART serkin_6 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4782g00016 Pral-Chr4782 113664 116124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4782g00016 18 619 Receptor kinase-like Gene Family AT1G15530 69.637 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral4782g00016 Pkinase 1.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4782g00016 - - pcin:129309359 1165.98