Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral477g00002 ATGATAAGCGAAACAAGTGCAAGAAATGGATCTCCTTTCACAGCAATTCAATGGCAAGAACTTGAACATCAAGCTCTTATCTTTAAATACCTGGTCTCAGGGAGCCCCATCCCACCTGATCTCATTTACTCTGTCGGAAGAAGCCTTGACTCTTCAATGTCTTCTTCTTCTTCTTCTTCTTCTTCAAGGCTCTTCCCCTTCCATCCAATTGGATGGGGATGCCTAGAAATGGGATATGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAAGAAGCCTATCCGGACTCAAAATACTGTGAGAGGCACATGCACAGGGGGAAAAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCAACAGCAACAACAGGCATTTCAACAAACACATCACAGCCAATCTCTTCACCGTATAGCAACAGAAGCCTTACCATGAGCAATGCCAATCCACCGTCAACAACTTCTTTCCCTTTCTCTCTATTGCCCTCTTCTGTGCCCTCCGATACCCAACCTTATTCCCATGTTTACCAAAATTCTTCTCTTAATCCCTTGTACTACACCCATTCAACCTCATGTAAACCTCTTGATTCTGATTTTCCTTCTCCAAAAAGCAATGCCCACCGGCTATTTTTGGACTCTGGACCTTATTCTAGGGATGAGGACTATAGGCATACTCATGGAATGAGGGAAGGTGTGGATGAGAGAGCTTTCTTTCCAGAAGCCTCGGGGAGTGTTAGGAGCTTTCCTGATTCATATCAACAATTACCATTGAGCTCCTGTAAGTCTTATTCAAACTCCCAGTTCCATAACATGAATGATAATCCAACTCCAAGACAGCAAGAAGAGCAACATTGCTTTGTCATGGAAAGAGACTTCAACTCACCGGGGCAAATAAAACAAGAGAATGAAACCGAGATGACCCAGAGATCCCTTCATCATTTCTTTGGTGAATGGCCTCCAAAGAACACAGATTCCTGGCTTGATCTCGCTTCAAATTCCAGAATCCCCTCTGATGAATGA 1050 0.439 MISETSARNGSPFTAIQWQELEHQALIFKYLVSGSPIPPDLIYSVGRSLDSSMSSSSSSSSSRLFPFHPIGWGCLEMGYGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEISSTATTGISTNTSQPISSPYSNRSLTMSNANPPSTTSFPFSLLPSSVPSDTQPYSHVYQNSSLNPLYYTHSTSCKPLDSDFPSPKSNAHRLFLDSGPYSRDEDYRHTHGMREGVDERAFFPEASGSVRSFPDSYQQLPLSSCKSYSNSQFHNMNDNPTPRQQEEQHCFVMERDFNSPGQIKQENETEMTQRSLHHFFGEWPPKNTDSWLDLASNSRIPSDE 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral477g00002 349 Pfam WRC 85 127 IPR014977 -
Pral477g00002 349 Pfam QLQ 12 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral477g00002 349 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral477g00002 349 ProSiteProfiles WRC domain profile. 84 128 IPR014977 -
Pral477g00002 349 MobiDBLite consensus disorder prediction 115 161 - -
Pral477g00002 349 MobiDBLite consensus disorder prediction 125 161 - -
Pral477g00002 349 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pral477g00002 349 PANTHER GROWTH-REGULATING FACTOR 5 11 337 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral477g00002 Pral-Chr477 25547 27231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral477g00002 12 127 GRF Transcription Factor Family AT3G13960 68.103 5.44e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pral477g00002 WRC 7.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral477g00002 - - pcin:129287482 563.918