Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4776g00015 ATGTCTGAGGATGCTAGCCCAATGTTGGTAGTTTATGATGATCCCTCAGACCAACGATCACTGTCTTTGGATGATGCAAGCAGCACGGAGGAATCACCAGATGAAACCAGGCTCTCTTTGGAGACTGCTAACGATTCAATTCCATATATTGGGCAAAGATTTAGCACTCATGATGCTGCATATGAATTTTATAGTGAATTTGCCAAGCGGTGTGGGTTTTCAATTCGACGACACCGTACAGAGGGAAAAGATGGTGTTGGAAAAGGACTGACTAGACGCTATTTTGTTTGCCATCGTGCTGGTAACACTCCTGTCAAAACATCAACTGAAAGTAAACCCCAAAGAAATCGAAAATCTTCCCGATGTGGATGCCAGGCTTACATGCGTATAAGCAAGACAACAGAATTAGGTACTCCAGAATGGCGTGTTACTGGTTTTGCCAACCACCATAATCATGAACTTTTAGAACCGAATCAAGTTCGATTTCTTCCTGCGTACAGAACTATTTCAGATTCTGACAAAAGTCGAATCCTGATGTATGCAAAAACTGGGATTTCTGTCCACCAAATGATGCGACTGATGGAGCTCGAGAAGTGTGTGGAACCTGGATATCTGCCTTTTACTGAAAAGGATGTGAGGAATTTACTTCAATCATTTAGGAAATTAGAACCAGAAGAGGAAAGCATAGATTTACTAAGAATGTGCAGAAATATTAAGGAGAAAGACCCTAATTTCAAATTTGAGTTCACACTTGATTCAAACAGCTGTTTGGAGAATGTAGCCTGGTCATATGCCTCCTCAATACAGTCATATGATATGTTTGGTGATGCAGTGGTATTTGACACAACACATCGCCTGACTGCATTCGACATGCCGTTGGGTATATGGGTTGGAATGAATAATTATGGAATGCCTTGCTTTTTTGGCTGTGTGCTTCTGCGAGAAGAAAACTTAAGGTCATATTCTTGGGCATTGAAGGCTTTCTTAGGGTTTATGAATGAGAAGGCTCCGCAGACAATATTAACAGACCAAAATATGTGTCTCAAAGAAGCATTAGCCATTGAAATGCCAGCAACTAAACATGCCCTCTGCATATGGATGATTGTAGCAAAATTTCCCTCTTGGTTTAGTGCTGTTCTAGGAGAACGTTACAATGAATGGAAGGCTGAATTTTATAGACTTTACAATCTTGAGTCAGTTGAGGACTTTGAACTAGGTTGGAGGGATATGGTCAGTTCTTTTGGGCTGCATGCCAGCAGGCACATTGCTAATTTATATACTTTACGTTCACTTTGGGCGTTGCCATTTCTGAGAAGCCATTTTTTAGCGGGAATGACTACAACTGGGCAGTCAAAATCAATTAATGCTTTCATTCAGCGATTTCTGAGTGCACAGACCCGGCTTGCACACTTTGTAGAGCAGGTAGCTGTTGCTGTGGATTTCAAAGATCAAACTGGTGAACAACAAACTATGCAACAGAATCTTCAAAATATTTGCCTCAAAACTGGAGCCCCTATGGAGTCACATGCTGCCACAATTCTCACTCCTTTTGCCTTTTCAAAGCTTCAGGAGCAACTTGTGTTGGGGGCTCATTATGCATCTTTTCCATTGGAAGATGGTTTCCTTGTGAGGCACCATACAAAAGCTGAGGGAGGTCGGAGAGTATATTGGGCTCCTAGGGAAGGAATTATAAGTTGCAGCTGCCACCAGTTTGAGTTCTCTGGAATTCTTTGCCGGCATGCTCTTAGAGTTCTTTCAACAGGAAATTGCTTTCAGATCCCCGATAGATATCTTCCCTCACGGTGGCGTCGCATCAGCATGACTTCTGCCAAGTCTTATCACAGTGCACCTAAGGATCACGCTGAAAGAGTACAGTTATTACAAAACATGGTTTCTGCTCTTATTACAGAATCTGCCAAGTCAAAGGAAAGACTGGATATTGCAACAGAGCAAGTTTCCCTCCTTCTATCTAGAATAAGGGAGCAACCCGTTTCATTACAAAGTGTTAGAGATATTTCTGGCATTGGTAGGAATGTTTGA 2040 0.4196 MSEDASPMLVVYDDPSDQRSLSLDDASSTEESPDETRLSLETANDSIPYIGQRFSTHDAAYEFYSEFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPVKTSTESKPQRNRKSSRCGCQAYMRISKTTELGTPEWRVTGFANHHNHELLEPNQVRFLPAYRTISDSDKSRILMYAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLEPEEESIDLLRMCRNIKEKDPNFKFEFTLDSNSCLENVAWSYASSIQSYDMFGDAVVFDTTHRLTAFDMPLGIWVGMNNYGMPCFFGCVLLREENLRSYSWALKAFLGFMNEKAPQTILTDQNMCLKEALAIEMPATKHALCIWMIVAKFPSWFSAVLGERYNEWKAEFYRLYNLESVEDFELGWRDMVSSFGLHASRHIANLYTLRSLWALPFLRSHFLAGMTTTGQSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNICLKTGAPMESHAATILTPFAFSKLQEQLVLGAHYASFPLEDGFLVRHHTKAEGGRRVYWAPREGIISCSCHQFEFSGILCRHALRVLSTGNCFQIPDRYLPSRWRRISMTSAKSYHSAPKDHAERVQLLQNMVSALITESAKSKERLDIATEQVSLLLSRIREQPVSLQSVRDISGIGRNV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4776g00015 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 653 IPR031052 GO:0006355
Pral4776g00015 679 Pfam MULE transposase domain 278 370 IPR018289 -
Pral4776g00015 679 Pfam SWIM zinc finger 555 587 IPR007527 GO:0008270
Pral4776g00015 679 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Pral4776g00015 679 MobiDBLite consensus disorder prediction 1 43 - -
Pral4776g00015 679 SMART 26again6 564 591 IPR006564 GO:0008270
Pral4776g00015 679 Pfam FAR1 DNA-binding domain 62 155 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4776g00015 Pral-Chr4776 384975 389810 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral4776g00015 MULE 5.7e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4776g00015 - - gmx:100810717 1259.97