Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4776g00013 ATGGCTGACATCGCTGTTACCGCGGCTGCAACTCTGTCGACACCGCTTGTGAATCTTGGGCTTAAAGCATTAAAGTCCATAGTTCAAAATCCCACGGCTTCGCGCGCTGAAATGCATAAAGCGCTCAACGATGGATTAAAGGATCTACTTGCTTCCCGGAGTGACAAGGACAGGGAAGTAGCTTTAAGCGATATCCAGAAAGAGCCGTCTCATGTTTACATGCGTTGGAAGGAGAGCGTATCAAACATTGAGAAAGAGGTGGCTTCCTTGAATGAAAAATATGAAGCAGGACGAAAGAAACGGTATGGATGTAAAGGACGAGATCCTGATAAGGAGACCATCAAAAGGGCACTCAATGAGGTAATCAAACTTACTGAAAAATGTCCAGATAAAATTCTAGTTGATAAGCTGCCAGAGCGGGTGATTAAAGAAATTGGTCTTCCATCAATTGCGGACTATCCGACTCTTAAGGAAGCCTTGGAAAACATTCAGACCCTGCTTCAAATTAACAGCGTAAAATGCGTGGCACTTTATGGACAAAAAGGGGTGGGGAAAACAATAATAGTGCAGCACTTGAATAACTACTTTTATGATAGCGTTGATAAGTTGTTTGATATGGTCATTTTCGTTAAAGTGTCAGCTGATGAGCAGACTAAAGACCTTCACATCCTGCAGAAAATTGCGGATCGAATAAAGGTGGATAGAGAAGGTAATGAATTTGAAGTTGCTGGAAGAATACAGAGAGTGCTAGTGAACAAAAGATATTTACTGATTTTAGATGGCGTAAGGCGCACAGCCGATGGGATTTGGCAGAAGTTGGATATTTCAAGAGACAAAAAAGATAGTAAGGTGGTAATAACCACGAGTTATCCTCTTGCTCGGAAATCAAAATGTGTCAACAGGAACGTCGATCTGAAAAAGTTATCCCCTCCTGAGGCATGGAAGATGTTTCGAGACATTGTTGGTGACAATTATTTACCACACCTACCAACCGCCAGGCTGGTATGCAAGAGGTTCTGCTCTGGTCTTCCCCTCCTTATAGATCCCATTGCAAAGTCTTTTAAATATCAAGAGTCTCCCCCTGATTGGCAGAAGGCTTTGAACGAATGGACGCCTTGGCCTCAAGTTGGAATCGATGAATTGAAAGAGTTATACTCAAAGTTGGAACTTTGTTATCAACTGTTGGGTGACCGAAGTAAACAAAAATGCTTCCTTTATGCTTCACTATATCCTGCAAACAGCAAGATATACACTGACTACTTAGTGGAGTGTTGTATAGTTCAGGGCTTTCTCGGCGCTGTTGATACAGATGCTAAGTATAGTGGCATGCGCAGTCGAGCAATTACTACGATATTGAGGCACCTTGTTAATGTTGCATTCTTGGAGGAAGGGGAACAAATGAGGTATGTAAAAATGAATGATCTCTACAGGCAACTTGCTTTATATATATCATCCAAAGATTCAGAATGTAGAACTTACGTTGATGATGAAGAACGTCAGGAGTCCTTTAGATCAGAATTATGGCAGCAGGCTAGATGGGTTTCTATGGTTGGCACTAACAGGAATATTCTTCCGGAAAACCAAACTTGTGGGAGTCTTCAAACTCTATTGCTACAAAAGAATCTAGAGTTGGTTGAAATTCCACCAGCCTATTTTGACAGCATGGGCAATCTTCTTGTGTTAAACTTATATCGAAATAAAATAAGAAGGTTACCATCTTTGTCAGGATTAGCCAGGCTTAAAGCGTTCTATCTAAATGGTTGTTCAGACTTGATAATATATCCATCTCAAATCCAACCACTTAAACATCTTGAGATATTTGACGTTCGAGATACTGGGGTGAATTTTGTGCCATGCTTGGAAAGTTTGCGGTGCCTAAGAATCTCATACATTGCAAGCAGTAATTATCAAGGAATTTCAGAGCTTCGCAAATTAGAAGAATTGACCATTGAAGTAAAATTCCTGCAGCAGTGGTGTCGTGATGCTGAAAATATTTTATCAGAAGTTGCTTCTTTGGAAAATTTATCAACTTTCAGGTGCGGCTTTCCTTCTTCAGAAATACTTGGAAAATTCCTGGAGACCAGCAAATCATGGAGAGGTAAGAAGCAATTTACTTCATTTCAATTTTTCGTGGGATGTGAAATCTCAAAACGTCCCAAAATCATTGAGTCTTTTAAGGATAGAATTTTCAAGTATGTAAAGTATTGTAATGGTGACAAAAAAGATGACTTGGCAATCACTGAGATACTCTCCCAAGCTGAAGCATTTGAGTTAATCTGTCACAACAATGTTGCAAATTTATGTGAGTTGGCAAGGTCATCAAACTTGGAATATCTCCGTATTTTACTTATCGACGGGTGCAATCAAATGTTAGTTGTTGTTCGAGGAGATCTGGTTTGCAATGCTATTAATGGCACCTTACCTAACAATGCAAGTCTCTTGCCAAACTTGGATCAATTACATTTGGACAATTTGCGAGATGTGAGGTGTGTTTTTAGGGGTCCTTTTCATCCCGGAAGCTTTTCCATGTTGCATACTTTGACATTGAAGAATTGTCCAGAGTTGACAAGTATCTTTTTCAATACAGCCGCTGATGAATTTCCTGAATTGCAGAAGTTAGTGGTTCAAGATTGTTCAAAAATTGAGGTTCTCATCAGCGGGCAAAGCATACTTCCGAAGTTGAAGATATTGACGTTGGATAACTTGTTAAACTTCAAATCCATATGCCCAAATAAAAATTTAGCATGGAGTTCTTTGGAGCGGTTAAATGTACAAAATTGCCCTGAGTTGAAAGCTCTACCTTTCAACACAACCAATGCAGCGAAACTAAGAACCATTAAAGGTGAGAAAGAATGGTGGAGCAATTTGGAGTGGACTCCTCTTGAGGTTCACAAGCGATTTGAATCTACATTTTCAGTTTCTACTTAA 2928 0.3989 MADIAVTAAATLSTPLVNLGLKALKSIVQNPTASRAEMHKALNDGLKDLLASRSDKDREVALSDIQKEPSHVYMRWKESVSNIEKEVASLNEKYEAGRKKRYGCKGRDPDKETIKRALNEVIKLTEKCPDKILVDKLPERVIKEIGLPSIADYPTLKEALENIQTLLQINSVKCVALYGQKGVGKTIIVQHLNNYFYDSVDKLFDMVIFVKVSADEQTKDLHILQKIADRIKVDREGNEFEVAGRIQRVLVNKRYLLILDGVRRTADGIWQKLDISRDKKDSKVVITTSYPLARKSKCVNRNVDLKKLSPPEAWKMFRDIVGDNYLPHLPTARLVCKRFCSGLPLLIDPIAKSFKYQESPPDWQKALNEWTPWPQVGIDELKELYSKLELCYQLLGDRSKQKCFLYASLYPANSKIYTDYLVECCIVQGFLGAVDTDAKYSGMRSRAITTILRHLVNVAFLEEGEQMRYVKMNDLYRQLALYISSKDSECRTYVDDEERQESFRSELWQQARWVSMVGTNRNILPENQTCGSLQTLLLQKNLELVEIPPAYFDSMGNLLVLNLYRNKIRRLPSLSGLARLKAFYLNGCSDLIIYPSQIQPLKHLEIFDVRDTGVNFVPCLESLRCLRISYIASSNYQGISELRKLEELTIEVKFLQQWCRDAENILSEVASLENLSTFRCGFPSSEILGKFLETSKSWRGKKQFTSFQFFVGCEISKRPKIIESFKDRIFKYVKYCNGDKKDDLAITEILSQAEAFELICHNNVANLCELARSSNLEYLRILLIDGCNQMLVVVRGDLVCNAINGTLPNNASLLPNLDQLHLDNLRDVRCVFRGPFHPGSFSMLHTLTLKNCPELTSIFFNTAADEFPELQKLVVQDCSKIEVLISGQSILPKLKILTLDNLLNFKSICPNKNLAWSSLERLNVQNCPELKALPFNTTNAAKLRTIKGEKEWWSNLEWTPLEVHKRFESTFSVST 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4776g00013 975 Pfam Leucine rich repeat 532 588 IPR001611 GO:0005515
Pral4776g00013 975 Gene3D Ribonuclease Inhibitor 750 957 IPR032675 -
Pral4776g00013 975 Gene3D - 308 395 IPR042197 -
Pral4776g00013 975 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 57 934 - -
Pral4776g00013 975 ProSiteProfiles Leucine-rich repeat profile. 557 578 IPR001611 GO:0005515
Pral4776g00013 975 SUPERFAMILY L domain-like 472 946 - -
Pral4776g00013 975 Pfam NB-ARC domain 163 393 IPR002182 GO:0043531
Pral4776g00013 975 Gene3D Ribonuclease Inhibitor 477 680 IPR032675 -
Pral4776g00013 975 Coils Coil 655 675 - -
Pral4776g00013 975 PRINTS Disease resistance protein signature 249 263 - -
Pral4776g00013 975 PRINTS Disease resistance protein signature 174 189 - -
Pral4776g00013 975 PRINTS Disease resistance protein signature 340 354 - -
Pral4776g00013 975 PRINTS Disease resistance protein signature 839 855 - -
Pral4776g00013 975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 406 IPR027417 -
Pral4776g00013 975 Coils Coil 73 100 - -
Pral4776g00013 975 Gene3D - 142 305 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4776g00013 Pral-Chr4776 355095 358022 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4776g00013 172 564 WRKY Transcription Factor Family AT5G45050 20.293 5.26e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4776g00013 - K13459 gmx:102661619 799.275