Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4776g00002 ATGGGAAGGAAAAAGACAGAGGAAGCCGGCGCTGCCGCAAAGGCTAAGAAAGAAAAGTTCTCTGTCTCTGCCATGCTTGCTAGTATGGATGAAAAACCTGATAAACCCAAGAAAGCATCTTCATCCAGTAAGCCCAAGGCAAAATCTGCTCCAAAAGTTTCTACATACACCGATGGTATTGATCTTCCTCCCTCTGATGATGAAGATGATGTCATGGAAGAGGAGGAAGAACAAGATAGTGCACCTAAGCGGTCCACTCAGCAGCAAAGGCCTGACTTAAAGCCTCTTGAGGTGTCTGTCACTGACAAAGAGGTAAAAAAGCGGGAAAAGAAGGATCTTCTAGCTGCCCATGCTGCAGAGTTGGCGAAACAGGAAGCACTTAGGGATGACCGTGATGCTTTTACTGTGGTCATTGGAAGCCGGACTTCAGTGCTTGATGGAGAAAATGACACTGATGCCAATGTGAAGGATGTGACAATAGAGAACTTTTCTGTGTCAGCTCGGGGTAAAGAACTCCTTAAGAATGCATCAGTGAAGATATCTCATGGGAAGAGGTATGGTTTAGTTGGGCCCAATGGAAAGGGTAAGTCCACACTGCTGAAGCTCCTTGCCTGGAGGAAGATACCAGTGCCAAAGAATATTGATGTGCTTCTGGTTGAGCAGGAGGTTGTTGGTGATGATAAAACGGCGCTTGAAGCTGTTGTTTCAGCTAATGAAGAACTTGTTAAAACCCGACAAGAAGTGGCTCTTCTTCAAAATGCAAGTTCTGTTGATGAAAGTGGAGACAAGGATGATGGTTATGAAGATGATGCAGGAGAGAAGCTTGCTGAGCTGTATGAGAAGTTACAGTTGATGGGATCTGATGCAGCTGAAGCTCAGGCATCAAAGATTCTAGCAGGATTAGGTTTTACAAAGGATATGCAGGCCCGCGCTACAAAATCATTTAGTGGGGGTTGGAGGATGAGAATTTCTTTAGCCAGAGCGCTTTTTGTTCAGCCAACTCTATTATTGCTTGATGAACCAACAAATCATCTTGACCTGAGAGCTGTTCTCTGGTTGGAGGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTCGTTTCACATGATAGGGATTTCCTAAATACAGTTTGTAATGAGATTATTCATTTGCATGATTTGAAACTTTATATCTACCGTGGAAATTTTGATGATTTTGAAAGTGGTTATGAGCAGCGCCGCAAAGAGATGAATAAGAAGTTTGAGATTTATGATAAGCAAATGAAAGCAGCCAAAAGAAGTGGAAATCGGGTTCAGCAGGAAAAGGTGAAGGATCGAGCTAAGTTTGCAGCTGCTAAGGAAGCAGCAAAAAGCAAGGGTAAAGGCAAGGGCAAGGTTGATGAGGATGATGCCCCAGCAGATGTTCCACAAAAGTGGAGGGATTACAGTGTTGAGTTTCACTTCCCTGAACCTACTGAACTAACACCTCCTTTGCTGCAGCTCATTGAAGTGAGCTTCAGCTATCCAAAGCGGCCAGATTTCAGACTCTCAAATGTTGATGTTGGCATTGATATGGGGACTCGTGTCGCCATTGTTGGGCCTAATGGAGCCGGGAAATCGACACTGCTGAATCTTCTTGCGGGTGACTTGTCTCCAACTGAGGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATCGGAAGATATTCCCAGCACTTTGTGGACCTCCTAACAATGGATGAAACACCTGTCCAGTATCTTCTTCGTCTTCATCCAGATCAGGAAGGGCTCAGTAAGCAGGAGGCTGTTCGAGCAAAACTTGGTAAGTTTGGATTGCCTAGTCATAATCATCTTACCCCTATTGTCAAACTATCAGGAGGGCAGAAAGCTCGGGTGGTATTCACCTCAATATCCATGTCAAAGCCCCACATTTTGCTGTTGGATGAACCCACTAATCATCTAGACATGCAAAGTATTGATGCGTTAGCTGATGCATTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATATCGCGTGTATGTGATGATGAAGAGAGGAGTCAAATATGGGTAGTTGAGGATGGTACCGTCAAATTCTTTGATGGAACTTTTGAGGATTACAAGGACGAATTGCTGAGAGAAATTAAAGCTGAAGTCGATGATTGA 2160 0.4412 MGRKKTEEAGAAAKAKKEKFSVSAMLASMDEKPDKPKKASSSSKPKAKSAPKVSTYTDGIDLPPSDDEDDVMEEEEEQDSAPKRSTQQQRPDLKPLEVSVTDKEVKKREKKDLLAAHAAELAKQEALRDDRDAFTVVIGSRTSVLDGENDTDANVKDVTIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANEELVKTRQEVALLQNASSVDESGDKDDGYEDDAGEKLAELYEKLQLMGSDAAEAQASKILAGLGFTKDMQARATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLYIYRGNFDDFESGYEQRRKEMNKKFEIYDKQMKAAKRSGNRVQQEKVKDRAKFAAAKEAAKSKGKGKGKVDEDDAPADVPQKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPKRPDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLSPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTVKFFDGTFEDYKDELLREIKAEVDD 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4776g00002 719 MobiDBLite consensus disorder prediction 1 15 - -
Pral4776g00002 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 406 IPR027417 -
Pral4776g00002 719 Coils Coil 407 427 - -
Pral4776g00002 719 Coils Coil 234 254 - -
Pral4776g00002 719 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 158 418 IPR003439 GO:0005524
Pral4776g00002 719 MobiDBLite consensus disorder prediction 1 103 - -
Pral4776g00002 719 FunFam ABC transporter F family member 4 156 439 - -
Pral4776g00002 719 MobiDBLite consensus disorder prediction 62 76 - -
Pral4776g00002 719 SMART AAA_5 182 387 IPR003593 GO:0016887
Pral4776g00002 719 SMART AAA_5 518 694 IPR003593 GO:0016887
Pral4776g00002 719 ProSitePatterns ABC transporters family signature. 315 329 IPR017871 GO:0005524|GO:0016887
Pral4776g00002 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 472 707 IPR027417 -
Pral4776g00002 719 Gene3D - 459 718 IPR027417 -
Pral4776g00002 719 MobiDBLite consensus disorder prediction 444 467 - -
Pral4776g00002 719 Gene3D - 155 441 IPR027417 -
Pral4776g00002 719 CDD ABCF_EF-3 492 694 - -
Pral4776g00002 719 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 492 717 IPR003439 GO:0005524
Pral4776g00002 719 Pfam ABC transporter 509 644 IPR003439 GO:0005524
Pral4776g00002 719 Pfam ABC transporter 173 343 IPR003439 GO:0005524
Pral4776g00002 719 CDD ABCF_EF-3 158 388 - -
Pral4776g00002 719 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 130 712 - -
Pral4776g00002 719 FunFam ABC transporter F family member 4 457 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4776g00002 Pral-Chr4776 4623 9597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4776g00002 492 695 Calmodulin-binding Proteins AT2G36910 28.700 1.26e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4776g00002 K06184 - gmx:100806865 1138.25