Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4775g00006 ATGGGCTGCTTATGTTCTAGAGGGACACATTCACACGATTATGTCGCAGAGAATCATGTGCAGAAAACAAAGAAATCCTCAAAGGGTACGTCAAGGAGGGATCAAAAGCTTGCAATGCAACAGGAATGTAGTGGATCAAACGATGTTAATACAAGGTTGATATCATCAGATGAGAGGGAGAAGAATGTTGGGACAACAGGGAAACCTGGGAATTCTCAGAGTAGAAGTGTGGAAGAAGGACCAAGTAGGATGACGATGTTAAATAGGATAGGTAGTATAAAAAGAGGAGAGAGAGGGGCCCAAGTTCTAGCTGGGTGGCCTTCATGGCTATCTGCTGTTGCAGGAGAAGCCATTAGTGGTTGGATTCCACGTAGATCAGAATCCTTTGAGAAGTTAGAGAAGATTGGACAAGGGACATATAGCAGCGTTTACAGAGCTAGAGATTTGGAAACAAATAAAATAGTTGCATTAAAGAAGGTTCGATTTGCCAATATGGACCCAGAAAGTGTTCGTTTCATGGCCAGAGAAATCATTATACTGCGAAGGCTTGATCATCCAAATGTGATGAAGCTTGAAGGAATGATTACCTCAAGGGTTTCTGGCAGCTTGTACCTTATTTTTGAATATATGGAACATGATCTCACAGGCCTCTCAGCTCTTCCTGGTATCAAGTTTTCCGAGGAGCAGATAAAGTGCTACATGCAGCAACTATTGAGAGGGTTAGAGCATTGTCACAAGAAGGGGGTGCTACACAGAGACATAAAAGGAGCAAATTTGCTAATAGACTACAAGGGCAATTTGAAAATTGCAGATTTTGGGCTAGCCACCCTGTTGGAAGGCCAAGCATTGACGAGCAGAGTTGTAACCTTGTGGTACAGATCTCCTGAACTATTACTAGGAGCCACCAATTACGGCGTTGCTGTTGACCTGTGGAGTGCTGGTTGCATTCTTGCAGAGCTCTTCGCCGGCAAGCCCATCATGCCCGGTCGTACCGAGGTGGAGCAACTGCATAAGATATTTAAACTTTGTGGATCACCTTCTGAGAAATACTGGAAGAAGTCGAAGCTGCCACATGCCACCATTTTCAAACCTCAACAACCTTACCAGCGCGTTGTTGCAGAGACTTTCAAGGATTTCCCACCCTCTGCCCTCAAACTTCTCGACGTTCTTCTTGCTATAGAACCTGACGATCGAGGAACTGCTTCCTCAGCACTTCAGAGCGAGTTCTTCACGACAAAGCCACTTCCTTGTGAGCCATCGAGTTTGCCGAGGTATCCACCAAGTAAGGAGTTTAATGTGAAGCTTCGAGAAGAGGAAGCCCGAAGAAGGAAAGGGGCAACGAGGAAAGGAAATGAACAAGAACCCGTGAAGAGCTCTGCCAACCCTAAAGCTGCCCCACCACCTGAAACAAAGTCCCACCTTTCAGCAGCCACTGAGAATCGAGCGGGGCCAAGGCCAAAGCGCAGGCTGGAGAAGAACGGCCTGCTCATTGAACCTGCAAGCACGAGAGGACCCAGAGTACTGTGTCATTCCGGCCAATCCACGGTGCAGAGTGCGTACATGAAAGTCATGAAGCATGAAGCCGCCGGCGGAGAACGCGAGGTGTTTGTTGGAACCAGGAGATCAAAGCAGAGAAACTACTGGAACGCCGCCAATGCCGCACGTCTCTCCAAGTTCTCTAACTCCGTGGCCGCCGACGGCGGCTCACGGCTCGACGTGATCGCCGGCGGAGCAAACTCCTCCGTGTGGGGAGACAACGGGTTCGGCGAGAGGTATCGACATGCGGCCGCCGGAGAATCCGACCTCTTGCTGCCTGCATCCAACAAGTCTAGCCTCAACAAACCTCTGACCAAGGATTATGGAGGGAAGAACGGGAAGATGCAATATTCAGGACCGTTGGTGTCTGCAACAGAGAACCTGGAAGAAATGTTGAAGCAACATGAACAACAAATCCAAAAAGTCTTACGTAAAGGTGGTTTGGATCATAAAAAGGTCAAGACCTAG 2004 0.482 MGCLCSRGTHSHDYVAENHVQKTKKSSKGTSRRDQKLAMQQECSGSNDVNTRLISSDEREKNVGTTGKPGNSQSRSVEEGPSRMTMLNRIGSIKRGERGAQVLAGWPSWLSAVAGEAISGWIPRRSESFEKLEKIGQGTYSSVYRARDLETNKIVALKKVRFANMDPESVRFMAREIIILRRLDHPNVMKLEGMITSRVSGSLYLIFEYMEHDLTGLSALPGIKFSEEQIKCYMQQLLRGLEHCHKKGVLHRDIKGANLLIDYKGNLKIADFGLATLLEGQALTSRVVTLWYRSPELLLGATNYGVAVDLWSAGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEKYWKKSKLPHATIFKPQQPYQRVVAETFKDFPPSALKLLDVLLAIEPDDRGTASSALQSEFFTTKPLPCEPSSLPRYPPSKEFNVKLREEEARRRKGATRKGNEQEPVKSSANPKAAPPPETKSHLSAATENRAGPRPKRRLEKNGLLIEPASTRGPRVLCHSGQSTVQSAYMKVMKHEAAGGEREVFVGTRRSKQRNYWNAANAARLSKFSNSVAADGGSRLDVIAGGANSSVWGDNGFGERYRHAAAGESDLLLPASNKSSLNKPLTKDYGGKNGKMQYSGPLVSATENLEEMLKQHEQQIQKVLRKGGLDHKKVKT 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4775g00006 667 MobiDBLite consensus disorder prediction 33 52 - -
Pral4775g00006 667 SUPERFAMILY Protein kinase-like (PK-like) 124 417 IPR011009 -
Pral4775g00006 667 PANTHER CELL DIVISION PROTEIN KINASE 127 416 - -
Pral4775g00006 667 Gene3D Phosphorylase Kinase; domain 1 124 216 - -
Pral4775g00006 667 Coils Coil 633 657 - -
Pral4775g00006 667 FunFam probable serine/threonine-protein kinase At1g54610 116 211 - -
Pral4775g00006 667 ProSiteProfiles Protein kinase domain profile. 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4775g00006 667 CDD STKc_CDK9_like 129 410 - -
Pral4775g00006 667 MobiDBLite consensus disorder prediction 16 32 - -
Pral4775g00006 667 FunFam probable serine/threonine-protein kinase At1g54610 212 450 - -
Pral4775g00006 667 SMART serkin_6 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4775g00006 667 MobiDBLite consensus disorder prediction 65 81 - -
Pral4775g00006 667 Gene3D Transferase(Phosphotransferase) domain 1 217 449 - -
Pral4775g00006 667 MobiDBLite consensus disorder prediction 16 83 - -
Pral4775g00006 667 MobiDBLite consensus disorder prediction 416 508 - -
Pral4775g00006 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Pral4775g00006 667 Pfam Protein kinase domain 129 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4775g00006 667 ProSitePatterns Protein kinases ATP-binding region signature. 135 158 IPR017441 GO:0005524
Pral4775g00006 667 MobiDBLite consensus disorder prediction 430 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4775g00006 Pral-Chr4775 29897 34042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4775g00006 121 484 Core Cell Cycle Gene Families AT5G10270 48.831 3.22e-116 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral4775g00006 Pkinase 6.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4775g00006 - - qsa:O6P43_031464 759.599