Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00242 ATGACAGCGTCCGATTCGCGATCCCACTCGTTCGGCCAGACTGAGATTAACTGGGACAAGCTAGATAAAACGAAGTTCTATGTTGTGGGAGCTGGACTCTTTACAGGTGTCACATTGGCACTCTACCCAGTTTCTGTAGTGAAGACTAGACTGCAGGTTGCCTCGAAGGATACTGGAGAAAGAAATGCATTTTCTGTTATAAAGGGATTACTTAGAACAGATGGGATTCCGGGTCTGTATAGAGGATTTGGCACAGTCATCACTGGTGCAATTCCTGCCAGAATCATATTTCTTACGACCCTAGAGACCACTAAGGTGGCCGCCTTCAGGATGCTTGAACCATTTAGACTCTCCGAAACCGGCCAGGCAGCCATAGCAAATGGAGCTGCTGGCTTGACATCATCACTTTTAGCTCAAGCTGTGTTTGTTCCCATTGATGTGGTGAGCCAAAAGTTGATGGTGCAAGGATACTCAGGTCATGCTCAATATAATGGTGGTCTGGATGTTGCTCGTAAAGTGTTAAGATCAGATGGCATCCGGGGATTATATAAAGGATTCGGTCTTTCTGTTATGACATATGCTCCTTCTAGTGCTGTATGGTGGGCAAGCTATGGTTCAAGCCAACGCTTAATTTGGAGATTCTTGGGCTATGCAGAAAATAAGGAAGGCAAACCTGGAGTGCAGAAGATCGTTTTAGTTCAGGCTACCGGGGGAATTATTGCTGGCGCAACTGCATCCTGCATTACGACACCATTGGATACTATTAAGACACGATTACAGGTGATGGGACATGAAAATAAAAGCTCTGTGAAACAAGTTGTCAAAGACTTGATAAACGAGGACGGTTGGAAAGGTTTATACAGAGGGTTAGGTCCAAGATTTTTCAGCATGTCGGCGTGGGGTACTTCTATGATATTAGCTTATGAATATCTGAAGCGCTTGTGTGCAAAAGATGAATAG 960 0.4479 MTASDSRSHSFGQTEINWDKLDKTKFYVVGAGLFTGVTLALYPVSVVKTRLQVASKDTGERNAFSVIKGLLRTDGIPGLYRGFGTVITGAIPARIIFLTTLETTKVAAFRMLEPFRLSETGQAAIANGAAGLTSSLLAQAVFVPIDVVSQKLMVQGYSGHAQYNGGLDVARKVLRSDGIRGLYKGFGLSVMTYAPSSAVWWASYGSSQRLIWRFLGYAENKEGKPGVQKIVLVQATGGIIAGATASCITTPLDTIKTRLQVMGHENKSSVKQVVKDLINEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00242 319 SUPERFAMILY Mitochondrial carrier 19 311 IPR023395 -
Pral4774g00242 319 Pfam Mitochondrial carrier protein 233 318 IPR018108 -
Pral4774g00242 319 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Pral4774g00242 319 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Pral4774g00242 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Pral4774g00242 319 FunFam Mitochondrial substrate carrier family protein 27 318 - -
Pral4774g00242 319 Gene3D Mitochondrial carrier domain 36 319 IPR023395 -
Pral4774g00242 319 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Pral4774g00242 319 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Pral4774g00242 319 PRINTS Mitochondrial carrier protein signature 238 260 IPR002067 GO:0055085
Pral4774g00242 319 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 5 318 - -
Pral4774g00242 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 229 314 IPR018108 -
Pral4774g00242 319 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00242 Pral-Chr4774 1416933 1420914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00242 16 319 Chloroplast and Mitochondria Gene Families AT5G15640 75.896 1.75e-173 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00242 K15121 - qsa:O6P43_009187 546.584