Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00234 ATGGTAGCCGCGATGGTTATGGGTTCAGAGAAAGCGTGGAAGAAAGGGCCTTGGACTCTGGAAGAGGATAAGCTGCTGAGTGAATATGTGAGCTTGCATGGTGAAGGAAGGTGGAGTTCAGTGGCCAAGTTTACAGGGTTAAATAGGAGTGGGAAAAGTTGCAGGTTGAGGTGGGTGAACTATCTGAAGCCAGGGCTGAAGAAAGGCCACTTAACACCTCAAGAAGAAGCCATCATACTTGAAATCCATGCTATGCTGGGTAACAAGTGGTCTACAATAGCAAAATATTTGCCAGGTAGAACAGACAATGAGATTAAGAACTACTGGAGAACCCATTTCAAGAAGAAAGACAAATCCTCTCGTATTAATAAGAAGCAAGAAAAGAGAAGATCAAGAATTCTTAAACAGATGAAACAACATGAGCAGCAGCAGCAGCAACCTCAACAGTGCGATGTGCAAAGCAGCATCTCGTCTCATGCAGAATCAAACAATCAAACAAACGTTTCTGCTGGGACTGTTCTAGAGGACACCTATCATCCAGTCACCACCATGGAAGACCAAGATAATTACTTGCCTTTCATGTACCAAGATTACTTTCCCTCCCTGTGGCCTGAAAATACTGTAGAACAAGATGAAGGTTTGTGGGTTACATTATGGAACCTTGACGAAGAAATACAAGGTCACAGGGACAATCAGTTCAACCAAAATGCCATTCATCATAACCAGATTACAACTTCCTGTTTCGATGATATTTCCAACAACCTCTGCTTTGCAAAATACATGTCCGGCTGA 792 0.4293 MVAAMVMGSEKAWKKGPWTLEEDKLLSEYVSLHGEGRWSSVAKFTGLNRSGKSCRLRWVNYLKPGLKKGHLTPQEEAIILEIHAMLGNKWSTIAKYLPGRTDNEIKNYWRTHFKKKDKSSRINKKQEKRRSRILKQMKQHEQQQQQPQQCDVQSSISSHAESNNQTNVSAGTVLEDTYHPVTTMEDQDNYLPFMYQDYFPSLWPENTVEQDEGLWVTLWNLDEEIQGHRDNQFNQNAIHHNQITTSCFDDISNNLCFAKYMSG 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00234 263 Gene3D - 14 67 - -
Pral4774g00234 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Pral4774g00234 263 SMART sant 14 64 IPR001005 -
Pral4774g00234 263 SMART sant 67 115 IPR001005 -
Pral4774g00234 263 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Pral4774g00234 263 MobiDBLite consensus disorder prediction 138 167 - -
Pral4774g00234 263 CDD SANT 72 113 IPR001005 -
Pral4774g00234 263 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 10 175 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pral4774g00234 263 Coils Coil 123 143 - -
Pral4774g00234 263 Gene3D - 71 116 - -
Pral4774g00234 263 Pfam Myb-like DNA-binding domain 71 112 IPR001005 -
Pral4774g00234 263 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Pral4774g00234 263 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pral4774g00234 263 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Pral4774g00234 263 FunFam Myb transcription factor 15 67 - -
Pral4774g00234 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Pral4774g00234 263 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00234 Pral-Chr4774 1357078 1358312 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00234 14 224 MYB Transcription Factor Family AT3G30210 54.245 1.46e-71 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4774g00234 Myb_DNA-binding 2.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00234 K09422 - gmx:100785540 250.751