Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4774g00224 ATGGTTCGCCAAGCTACTTTAGTTATCATTGGTGTTACAGTTGGCGTGGCCTTTGGAATTTTTATCGCTTCCCTTATATTTTTTGGGATAAGGTGGTATAAGAAGCATGCTCGTCTTACATATTCTGCAAAAGAGAGTAGTTTAACCACTCTTCCAATACGCACAAATGGATTAGGAACAAGCACTGACTTTAGTGCCTCTCTTACAAGTTCCATATCCAATTCGATGTCAGAAAATCTGCAAAGAAACTCCAATGTCTCTTGGTGGAGTCATCAAAACAAAGATCGATTTTCTCCAACATCTGGCATTTCAAAGTACTCATACAAAGAGATCCAAAAGGCTACACAGAATTTCACAACTATTTTGGGACAAGGATCATTTGGCACAGTTTATAAAGCCACAATGCCTACAGGAGAGGTGGTAGCTGTGAAGGTGCTTGACTCTAATTCTAAACAAGGGGAGAAAGAATTCCAAACAGAGGTGCTTTTGCTGGGACGATTGCATCATCGGAATCTTGTGAATTTAGTAGGATATTGTGTAGATAAGGGACAGCGTATTCTGGTTTATGAGTTCATGAGCCATGGAAGCTTGTCAAACCTTTTATACAGTGATGTAAAGGCTTTGAGTTGGAACGAAAGGCTTCAAATTGTTATTGATATTTCACATGGAATTGAATACCTTCACGAAGGAGCAGTACCACCCGTTATACATCGTGATTTGAAGTCTGCCAATATATTGTTAGATCATTCGATGAGAGCTAAGGTTGCTGATTTTGGGTTGTCAAAGGAAGAGGTCTTTGATGGCCGGAATTCAGGCCTTAAAGGTACATACGGCTACATGGACCCAGCATACGTTTCCTCAAACAAGTTCACAATGAAGAGTGACATCTACAGTTTTGGTATCATCATTTTTGAGCTCATTACAGCCATTCACCCTCACCAAAATTTGATGGAATATATTAACCTTGCTGCAATGGAACATGATGGCGTAGATGAGATACTTGACAAACAACTTGTAGGAAAATGCAACCTTGAGGAAGTAAGGCAGCTTGCTAAAATTGCTTATAAATGTTTGCACAGATCTCCCAGGAAACGCCCTTCCATTGGCAGTAACTTCTCCAGAGCTTTGAGCCGAATAGAGGATCAGGTTGAATTAAATAGGTTAACCGCCATGAACCTTGGAGAAACTGGATGA 1194 0.4028 MVRQATLVIIGVTVGVAFGIFIASLIFFGIRWYKKHARLTYSAKESSLTTLPIRTNGLGTSTDFSASLTSSISNSMSENLQRNSNVSWWSHQNKDRFSPTSGISKYSYKEIQKATQNFTTILGQGSFGTVYKATMPTGEVVAVKVLDSNSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCVDKGQRILVYEFMSHGSLSNLLYSDVKALSWNERLQIVIDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEVFDGRNSGLKGTYGYMDPAYVSSNKFTMKSDIYSFGIIIFELITAIHPHQNLMEYINLAAMEHDGVDEILDKQLVGKCNLEEVRQLAKIAYKCLHRSPRKRPSIGSNFSRALSRIEDQVELNRLTAMNLGETG 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4774g00224 397 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 381 - -
Pral4774g00224 397 CDD STKc_IRAK 122 369 - -
Pral4774g00224 397 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Pral4774g00224 397 ProSiteProfiles Protein kinase domain profile. 116 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00224 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Pral4774g00224 397 Gene3D Transferase(Phosphotransferase) domain 1 192 392 - -
Pral4774g00224 397 Gene3D Phosphorylase Kinase; domain 1 76 191 - -
Pral4774g00224 397 Pfam Protein tyrosine and serine/threonine kinase 118 368 IPR001245 GO:0004672|GO:0006468
Pral4774g00224 397 SMART serkin_6 116 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4774g00224 397 SUPERFAMILY Protein kinase-like (PK-like) 86 368 IPR011009 -
Pral4774g00224 397 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 90 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4774g00224 Pral-Chr4774 1293233 1298364 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4774g00224 102 368 Receptor kinase-like Gene Family AT3G19300 42.391 2.33e-70 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pral4774g00224 PK_Tyr_Ser-Thr 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4774g00224 - - gmx:100819995 652.129