LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4774g00202	ATGGGCATAAAAGCTTCTCTGTGGGATCCTCATGGTGTCTTGGATAATTGGGATGCGGATGCAGTTGATCCTTGTAGCTGGACTATGGTTACCTGTTCGCCGGACAACTTGGTCATTGGCCTGGGTACTCCCAGTCAAAGTCTAGCAGGTACTCTGTCTCCAAGCATAGGCAACCTAACGAACCTTCATATTGTGCTGCTACAGAATAATAATATAACAGGTCCAATACCTTCGGAGCTGGGCAGGCTTTCAAACCTTCATACACTTGATCTCTCTAATAACTTATTCAATGGGGGAATTCCTCCCTCTCTCAGTCACTTGAGAAGCCTCCAATACCTGAGGCTCAACAATAACAGTCTTTCTGGAGAGTGCCCAGAGCCACTTGCTAACATGTCACAGCTTGCTTTTCTCGACTTGTCCTACAACAACCTTAGTGGCCCTATGCCTAGAATTTTGGCCAAATCATTCAACATTGTCGGAAACCCTCTTGTATGTGGTACGGGGAAAGAGGCAAAATGCCATGGCATGATGACATTAATGCCCATGTCCATGAACTTGAACACTACAGAGGATGCTATATCATCAGACAAAACAAAATCACACAAGGTCGCCATTGCCTTTGGCCTAAGTCTAGGATGTCTTTGCTTGATAGCTCTTGGTTTTGGGCTATTTCTGTGGTGGAGGCACAAGCATAACCAACAGGCATTTTTTGATGTCAAAGACCGGTATCATGAAGAAGTGTACCTTGGAAACCTGAAGAGATTCCAATTCAGAGAACTCCAGATAGCCACTCACAACTTCAGCAGCAAGAACATTCTGGGAAAGGGCGGCTTTGGAAATGTGTACAAAGGAGTGCTCCCAGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATAGGAGGAGAGATCCAATTTCAGACTGAAGTTGAAATGATTAGCTTGGCCGTGCACCGAAACCTCCTCAGACTCTACGGATTCTGTATAACACCGACTGAAAGACTTCTGGTTTACCCTTACATGTCTAATGGCAGTGTCGCTTCCCGTCTAAAGGTTAAACCAGTGTTAGACTGGGGCACTAGGAAGCAAATTGCCCTGGGGGCAGCCAGGGGACTCTTATACCTTCATGAGCAGTGTGATCCAAAGATAATTCATAGGGATGTGAAAGCTGCAAACATATTACTTGATGACTATTGTGAGGCAGTAGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCACCAAGATTCACATGTTACAACTGCAGTGAGAGGCACTGTGGGGCATATTGCTCCTGAGTATCTTTCCACTGGGCAATCCTCTGAGAAAACTGATGTCTTCGGATTTGGCATTCTCCTTCTTGAACTGATCACAGGCCAGAGGGCTCTAGAATTTGGGAAGGCCGCAAATCAGAAAGGGGCCATGTTAGATTGGGTGAAGAAAATTCATCAGGAGAAGAAGCTAGAACTGTTCGTGGACAAGGATCTGAAGAACAACTATGATAGGATTGAGCTGGAAGAAATGGTTCAAGTGGCTCTCTTGTGCACTCAATACCTTCCCGGGCACAGGCCCAAAATGTCGGAAGTAGTAAGGATGCTGGAAGGAGATGGATTGGCAGAAAGATGGGAAGCTTCTCAGAGAGCTTATATGAGCAAGTGCAAGGCTCTTGAATTGTCTTCATCTGATCGATATTCTGATCTCACTGATGACTCCTCGATGCAAGTCCAGGCCATGGAACTTTCAGGTCCTAGGTGA	1764	0.4575	MGIKASLWDPHGVLDNWDADAVDPCSWTMVTCSPDNLVIGLGTPSQSLAGTLSPSIGNLTNLHIVLLQNNNITGPIPSELGRLSNLHTLDLSNNLFNGGIPPSLSHLRSLQYLRLNNNSLSGECPEPLANMSQLAFLDLSYNNLSGPMPRILAKSFNIVGNPLVCGTGKEAKCHGMMTLMPMSMNLNTTEDAISSDKTKSHKVAIAFGLSLGCLCLIALGFGLFLWWRHKHNQQAFFDVKDRYHEEVYLGNLKRFQFRELQIATHNFSSKNILGKGGFGNVYKGVLPDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCITPTERLLVYPYMSNGSVASRLKVKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVKKIHQEKKLELFVDKDLKNNYDRIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRAYMSKCKALELSSSDRYSDLTDDSSMQVQAMELSGPR	587

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4774g00202	587	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	1	175	-	-
	Pral4774g00202	587	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	2	547	-	-
	Pral4774g00202	587	ProSitePatterns	Protein kinases ATP-binding region signature.	273	295	IPR017441	GO:0005524
	Pral4774g00202	587	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	386	398	IPR008271	GO:0004672\|GO:0006468
	Pral4774g00202	587	MobiDBLite	consensus disorder prediction	566	587	-	-
	Pral4774g00202	587	SUPERFAMILY	Protein kinase-like (PK-like)	251	551	IPR011009	-
	Pral4774g00202	587	Pfam	Leucine rich repeat	61	120	IPR001611	GO:0005515
	Pral4774g00202	587	ProSiteProfiles	Protein kinase domain profile.	267	522	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4774g00202	587	FunFam	Somatic embryogenesis receptor-like kinase 1	344	556	-	-
	Pral4774g00202	587	Pfam	Leucine rich repeat N-terminal domain	2	33	IPR013210	-
	Pral4774g00202	587	Gene3D	Transferase(Phosphotransferase) domain 1	344	556	-	-
	Pral4774g00202	587	Pfam	Protein kinase domain	268	534	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4774g00202	587	FunFam	Somatic embryogenesis receptor kinase 1	236	343	-	-
	Pral4774g00202	587	Gene3D	Ribonuclease Inhibitor	1	175	IPR032675	-
	Pral4774g00202	587	MobiDBLite	consensus disorder prediction	566	581	-	-
	Pral4774g00202	587	Gene3D	Phosphorylase Kinase; domain 1	236	343	-	-
	Pral4774g00202	587	SMART	serkin_6	267	522	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4774g00202	587	SUPERFAMILY	L domain-like	3	158	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4774g00202	Pral-Chr4774	1171333	1174510	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4774g00202	1	587	Receptor kinase-like Gene Family	AT5G16000	79.461	0.0	957

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Pral4774g00202		Pkinase	1.2e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4774g00202	-		-	gmx:100797768	1065.06